RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 IFIH1Q9BYX4 1025 aaKnown RBP24.83■■□□□ 1.57
LDB1-201ENST00000361198 ARMCX3Q9UH62 379 aaPredicted RBP24.83■■□□□ 1.57
LDB1-201ENST00000361198 PCDHA13Q9Y5I0 950 aa24.83■■□□□ 1.57
LDB1-201ENST00000361198 AKR1B10O60218 316 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 NR3C1P04150 777 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 BCRP11274 1271 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 EPS15P42566 896 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 GHRHRQ02643 423 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 PARVGQ9HBI0 331 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 GINM1Q9NU53 330 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 FRMPD4Q14CM0 1322 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 MACROD2A1Z1Q3 448 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 CLIC2O15247 247 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 TLR2O60603 784 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 ASTE1Q2TB18 679 aaPredicted RBP24.82■■□□□ 1.56
LDB1-201ENST00000361198 IKZF4Q9H2S9 585 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 PPP1R9AQ9ULJ8 1098 aa24.82■■□□□ 1.56
LDB1-201ENST00000361198 TARSL2A2RTX5 802 aaKnown RBP24.81■■□□□ 1.56
LDB1-201ENST00000361198 TGFB1I1O43294 461 aa24.81■■□□□ 1.56
LDB1-201ENST00000361198 MCM3P25205 808 aa24.81■■□□□ 1.56
LDB1-201ENST00000361198 CASP4P49662 377 aa24.81■■□□□ 1.56
LDB1-201ENST00000361198 CKAP4Q07065 602 aaKnown RBP24.81■■□□□ 1.56
LDB1-201ENST00000361198 ZC2HC1CQ53FD0 456 aaPredicted RBP24.81■■□□□ 1.56
LDB1-201ENST00000361198 SYTL5Q8TDW5 730 aaPredicted RBP24.81■■□□□ 1.56
LDB1-201ENST00000361198 FIZ1Q96SL8 496 aa24.81■■□□□ 1.56
LDB1-201ENST00000361198 FZD9O00144 591 aa24.81■■□□□ 1.56
LDB1-201ENST00000361198 GYS2P54840 703 aa24.81■■□□□ 1.56
LDB1-201ENST00000361198 MRPS9P82933 396 aaKnown RBP24.81■■□□□ 1.56
LDB1-201ENST00000361198 TSGA10Q9BZW7 698 aa24.81■■□□□ 1.56
LDB1-201ENST00000361198 RPAP3Q9H6T3 665 aaPredicted RBP24.81■■□□□ 1.56
LDB1-201ENST00000361198 DHX15O43143 795 aaKnown RBP24.8■■□□□ 1.56
LDB1-201ENST00000361198 SRGAP2O75044 1071 aa24.8■■□□□ 1.56
LDB1-201ENST00000361198 SPP2Q13103 211 aa24.8■■□□□ 1.56
LDB1-201ENST00000361198 NUCKS1Q9H1E3 243 aaKnown RBP24.8■■□□□ 1.56
LDB1-201ENST00000361198 ZMYM2Q9UBW7 1377 aa24.8■■□□□ 1.56
LDB1-201ENST00000361198 SSU72P8A0A1W2PR75 194 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 EIF3DO15371 548 aaKnown RBP eCLIP24.79■■□□□ 1.56
LDB1-201ENST00000361198 RPL13P26373 211 aaKnown RBP24.79■■□□□ 1.56
LDB1-201ENST00000361198 ZNF131P52739 623 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 RPS6P62753 249 aaKnown RBP24.79■■□□□ 1.56
LDB1-201ENST00000361198 MAPK8IP2Q13387 824 aaPredicted RBP24.79■■□□□ 1.56
LDB1-201ENST00000361198 TKFCQ3LXA3 575 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 SFMBT2Q5VUG0 894 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 SYN2Q92777 582 aaPredicted RBP24.79■■□□□ 1.56
LDB1-201ENST00000361198 SECISBP2LQ93073 1101 aaKnown RBP24.79■■□□□ 1.56
LDB1-201ENST00000361198 VIPAS39Q9H9C1 493 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 XRCC5P13010 732 aaKnown RBP24.79■■□□□ 1.56
LDB1-201ENST00000361198 GFPT1Q06210 699 aaPredicted RBP24.79■■□□□ 1.56
LDB1-201ENST00000361198 ITGB3BPQ13352 177 aaPredicted RBP24.79■■□□□ 1.56
LDB1-201ENST00000361198 TDRD12Q587J7 1177 aaKnown RBP24.79■■□□□ 1.56
LDB1-201ENST00000361198 PCNX4Q63HM2 1172 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 MIER3Q7Z3K6 550 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 KSR1Q8IVT5 923 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 TAAR1Q96RJ0 339 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 GANQ9H2C0 597 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 UBIAD1Q9Y5Z9 338 aa24.79■■□□□ 1.56
LDB1-201ENST00000361198 MYH11P35749 1972 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 USO1O60763 962 aaKnown RBP24.78■■□□□ 1.56
LDB1-201ENST00000361198 AFPP02771 609 aaKnown RBP24.78■■□□□ 1.56
LDB1-201ENST00000361198 PRAMEF18Q5VWM3 479 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 NIPA1Q7RTP0 329 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 KCND2Q9NZV8 630 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 LTBP3Q9NS15 1303 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 LRRIQ3A6PVS8 624 aaPredicted RBP24.78■■□□□ 1.56
LDB1-201ENST00000361198 N4BP1O75113 896 aaKnown RBP24.78■■□□□ 1.56
LDB1-201ENST00000361198 EIF2AK2P19525 551 aaKnown RBP24.78■■□□□ 1.56
LDB1-201ENST00000361198 SLC9C1Q4G0N8 1177 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 DCAF17Q5H9S7 520 aaPredicted RBP24.78■■□□□ 1.56
LDB1-201ENST00000361198 ZNF720Q7Z2F6 126 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 ZKSCAN4Q969J2 545 aaPredicted RBP24.78■■□□□ 1.56
LDB1-201ENST00000361198 WNK4Q96J92 1243 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 AGO4Q9HCK5 861 aaKnown RBP24.78■■□□□ 1.56
LDB1-201ENST00000361198 ODF2LQ9ULJ1 636 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 FZD1Q9UP38 647 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 MYH10P35580 1976 aa24.78■■□□□ 1.56
LDB1-201ENST00000361198 SLC16A3O15427 465 aaKnown RBP24.77■■□□□ 1.56
LDB1-201ENST00000361198 ACTN1P12814 892 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 SLC9A1P19634 815 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 DPY19L2P1Q6NXN4 242 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 FAM178BQ8IXR5 827 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 FAM71BQ8TC56 605 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 MED4Q9NPJ6 270 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 JADE2Q9NQC1 790 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 VPS18Q9P253 973 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 SEL1LQ9UBV2 794 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 PCDHB13Q9Y5F0 798 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 SERPING1P05155 500 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 EPB41P11171 864 aaKnown RBP24.77■■□□□ 1.56
LDB1-201ENST00000361198 MAGEA1P43355 309 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 NEK9Q8TD19 979 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 ACBD3Q9H3P7 528 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 MLXIPQ9HAP2 919 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 METTL14Q9HCE5 456 aaKnown RBP24.77■■□□□ 1.56
LDB1-201ENST00000361198 MAP3K20Q9NYL2 800 aaKnown RBP24.77■■□□□ 1.56
LDB1-201ENST00000361198 CTDP1Q9Y5B0 961 aaPredicted RBP24.77■■□□□ 1.56
LDB1-201ENST00000361198 CAPN6Q9Y6Q1 641 aa24.77■■□□□ 1.56
LDB1-201ENST00000361198 ARHGEF35A5YM69 484 aa24.76■■□□□ 1.55
LDB1-201ENST00000361198 MTMR1Q13613 665 aa24.76■■□□□ 1.55
LDB1-201ENST00000361198 RAPGEF1Q13905 1077 aa24.76■■□□□ 1.55
LDB1-201ENST00000361198 ODR4Q5SWX8 454 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms