RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 PEX3P56589 373 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 PPFIA1Q13136 1202 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 TTLL12Q14166 644 aaPredicted RBP12.19□□□□□ -0.46
SSU72-202ENST00000359060 EDRF1Q3B7T1 1238 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 RNF10Q8N5U6 811 aaKnown RBP12.19□□□□□ -0.46
SSU72-202ENST00000359060 MYO3BQ8WXR4 1341 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 MEIS2O14770 477 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 ZBTB39O15060 712 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 GGCXP38435 758 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 EPHB4P54760 987 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 FRMD5Q7Z6J6 570 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 GLYCTKQ8IVS8 523 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 AGBL1Q96MI9 1066 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 FNBP1Q96RU3 617 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 L1RE1Q9UN81 338 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 SIK3Q9Y2K2 1263 aa12.19□□□□□ -0.46
SSU72-202ENST00000359060 XIRP1Q702N8 1843 aaKnown RBP12.18□□□□□ -0.46
SSU72-202ENST00000359060 PITPNM2Q9BZ72 1349 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 SREBF1P36956 1147 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 GCLMP48507 274 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 CASP5P51878 434 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 PTK2Q05397 1052 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 RNF187Q5TA31 235 aaPredicted RBP12.18□□□□□ -0.46
SSU72-202ENST00000359060 LRRC55Q6ZSA7 311 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 MSANTD4Q8NCY6 345 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 CASZ1Q86V15 1759 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 DRAP1Q14919 205 aaPredicted RBP12.18□□□□□ -0.46
SSU72-202ENST00000359060 EZH2Q15910 746 aaKnown RBP12.18□□□□□ -0.46
SSU72-202ENST00000359060 RINT1Q6NUQ1 792 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 PACSIN1Q9BY11 444 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 VCPKMTQ9H867 229 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 H3BQF6 201 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 CEP85LQ5SZL2 805 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 PAPD7Q5XG87 772 aaKnown RBP12.18□□□□□ -0.46
SSU72-202ENST00000359060 CIAPIN1Q6FI81 312 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 STYK1Q6J9G0 422 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 RSBN1LQ6PCB5 846 aaPredicted RBP12.18□□□□□ -0.46
SSU72-202ENST00000359060 FMNL3Q8IVF7 1028 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 TRIM59Q8IWR1 403 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 PROCA1Q8NCQ7 364 aaPredicted RBP12.18□□□□□ -0.46
SSU72-202ENST00000359060 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 EXOC7Q9UPT5 735 aa12.18□□□□□ -0.46
SSU72-202ENST00000359060 UTP11Q9Y3A2 253 aaKnown RBP12.18□□□□□ -0.46
SSU72-202ENST00000359060 GSTTP1A0A1W2PQM5 241 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 EML1O00423 815 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 HIP1RO75146 1068 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 POLD1P28340 1107 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 MTMR1Q13613 665 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 FAM151AQ8WW52 585 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 GMCL1Q96IK5 515 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 IFT74Q96LB3 600 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 IDI2Q9BXS1 227 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 RBM12Q9NTZ6 932 aaKnown RBP12.17□□□□□ -0.46
SSU72-202ENST00000359060 ATF5Q9Y2D1 282 aaPredicted RBP12.17□□□□□ -0.46
SSU72-202ENST00000359060 AHDC1Q5TGY3 1603 aaPredicted RBP12.17□□□□□ -0.46
SSU72-202ENST00000359060 EBAG9O00559 213 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 NKRFO15226 690 aaKnown RBP eCLIP12.17□□□□□ -0.463e-6■■■■□ 24.3
SSU72-202ENST00000359060 AKAP3O75969 853 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 LMNB1P20700 586 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 KCNA1Q09470 495 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 MESDQ14696 234 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 RMDN3Q96TC7 470 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 DNAJC18Q9H819 358 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 DMGDHQ9UI17 866 aaKnown RBP12.17□□□□□ -0.46
SSU72-202ENST00000359060 PGRMC1O00264 195 aaKnown RBP12.17□□□□□ -0.46
SSU72-202ENST00000359060 ARP10275 920 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 ACTN2P35609 894 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 RASA3Q14644 834 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 POMGNT1Q8WZA1 660 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 ACCSQ96QU6 501 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 TAOK3Q9H2K8 898 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 FEM1BQ9UK73 627 aa12.17□□□□□ -0.46
SSU72-202ENST00000359060 A0A1W2PRG0 241 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 LRRIQ3A6PVS8 624 aaPredicted RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 SLC16A4O15374 487 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 GNGT1P63211 74 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 SPP2Q13103 211 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 SEL1L2Q5TEA6 688 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 CCNI2Q6ZMN8 369 aaPredicted RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 PRPF38AQ8NAV1 312 aaKnown RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 HNRNPLLQ8WVV9 542 aaKnown RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 CEP170P1Q96L14 293 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 RASAL2Q9UJF2 1139 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 PDE2AO00408 941 aaPredicted RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 NDUFAB1O14561 156 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 TNNI1P19237 187 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 ZNF746Q6NUN9 644 aaPredicted RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 CCDC50Q8IVM0 306 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 RNF14Q9UBS8 474 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 HNRNPDLO14979 420 aaKnown RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 BAG6P46379 1132 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 MXI1P50539 228 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 CDK17Q00537 523 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 SETQ01105 290 aaPredicted RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 DMP1Q13316 513 aaPredicted RBP12.16□□□□□ -0.46
SSU72-202ENST00000359060 EPHA7Q15375 998 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 KLHDC7AQ5VTJ3 777 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 UBL4BQ8N7F7 174 aa12.16□□□□□ -0.46
SSU72-202ENST00000359060 LRRC45Q96CN5 670 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms