RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 KIAA1755Q5JYT7 1200 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 BEND6Q5SZJ8 279 aaPredicted RBP15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 WDR93Q6P2C0 686 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 CATSPER3Q86XQ3 398 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 PURBQ96QR8 312 aaKnown RBP15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 KIAA1683Q9H0B3 1180 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 ZSWIM4Q9H7M6 989 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 ST7Q9NRC1 585 aa15.75■□□□□ 0.11
NIPAL3-203ENST00000358028 CENPFP49454 3210 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 MSH4O15457 936 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 CYP2C8P10632 490 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 RPA1P27694 616 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 CCDC40Q4G0X9 1142 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 ARSHQ5FYA8 562 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 FAM83BQ5T0W9 1011 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 TEX2Q8IWB9 1127 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 MMRN2Q9H8L6 949 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 TMOD4Q9NZQ9 345 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 VAV3Q9UKW4 847 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 PLAGL2Q9UPG8 496 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 SAR1BQ9Y6B6 198 aa15.74■□□□□ 0.11
NIPAL3-203ENST00000358028 COL11A1P12107 1806 aaPredicted RBP15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 CCDC66A2RUB6 948 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 EPHB6O15197 1021 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 EIF3JO75822 258 aaKnown RBP15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 SPATA31C1P0DKV0 1188 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 OAS2P29728 719 aaKnown RBP15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 CYP2C19P33261 490 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 ZNF76P36508 570 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 VAV2P52735 878 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 SPA17Q15506 151 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 NELFCDQ8IXH7 590 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 TXLNBQ8N3L3 684 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 SYT2Q8N9I0 419 aaPredicted RBP15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 C12orf42Q96LP6 360 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 FAM207AQ9NSI2 230 aaPredicted RBP15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 DNM3Q9UQ16 869 aa15.73■□□□□ 0.11
NIPAL3-203ENST00000358028 ADGRA2Q96PE1 1338 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 GNA14O95837 355 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 VCAM1P19320 739 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 PSMC6P62333 389 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 RAD51AP2Q09MP3 1159 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 ZC3H3Q8IXZ2 948 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 ZNF296Q8WUU4 475 aaPredicted RBP15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 SCFD1Q8WVM8 642 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 PNKPQ96T60 521 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 TANGO6Q9C0B7 1094 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 KCTD10Q9H3F6 313 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 ZFYVE28Q9HCC9 887 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 L1RE1Q9UN81 338 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 SLC45A1Q9Y2W3 748 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 TARSL2A2RTX5 802 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 GPR25O00155 361 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 MEIS1O00470 390 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 USO1O60763 962 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 LCA5LO95447 670 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 USP14P54578 494 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 MARSP56192 900 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 KIF5AQ12840 1032 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 GIT2Q14161 759 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 IQCEQ6IPM2 695 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 CTU1Q7Z7A3 348 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 NEK11Q8NG66 645 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 CCDC42Q96M95 316 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 PARK7Q99497 189 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 POLR3CQ9BUI4 534 aaPredicted RBP15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 RANBP17Q9H2T7 1088 aaKnown RBP15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 TFR2Q9UP52 801 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 A0A0G2JMZ2 1700 aa15.72■□□□□ 0.11
NIPAL3-203ENST00000358028 IGLV3-22A0A075B6J6 115 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 RCCD1A6NED2 376 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 TLR2O60603 784 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 KCNMA1Q12791 1236 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 PABPC4Q13310 644 aaKnown RBP eCLIP15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 PDXDC1Q6P996 788 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 CCDC174Q6PII3 467 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 CHURC1Q8WUH1 139 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 BAP1Q92560 729 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 NUCKS1Q9H1E3 243 aaKnown RBP15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 ASCC2Q9H1I8 757 aaPredicted RBP15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 ACBD3Q9H3P7 528 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 ZHX3Q9H4I2 956 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 VCPKMTQ9H867 229 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 ARHGAP20Q9P2F6 1191 aa15.71■□□□□ 0.11
NIPAL3-203ENST00000358028 SMCHD1A6NHR9 2005 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 CCDC85CA6NKD9 419 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 LRRC53A6NM62 1247 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 GCOM1H8Y6P7 765 aaPredicted RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 PLEKP08567 350 aaPredicted RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 POLR2MP0CAP2 368 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 EDRF1Q3B7T1 1238 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 RRAGAQ7L523 313 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 TRIM59Q8IWR1 403 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 CYP2W1Q8TAV3 490 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 EIF2AK1Q9BQI3 630 aaKnown RBP15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 REEP2Q9BRK0 252 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 LACRTQ9GZZ8 138 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 SH2D4AQ9H788 454 aa15.7■□□□□ 0.1
NIPAL3-203ENST00000358028 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms