RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 DDX39AO00148 427 aaKnown RBP22.35■■□□□ 1.17
COL13A1-202ENST00000357811 COPB2P35606 906 aa22.35■■□□□ 1.17
COL13A1-202ENST00000357811 MARSP56192 900 aaKnown RBP22.35■■□□□ 1.17
COL13A1-202ENST00000357811 HHIPL2Q6UWX4 724 aa22.35■■□□□ 1.17
COL13A1-202ENST00000357811 SLC35C1Q96A29 364 aa22.35■■□□□ 1.17
COL13A1-202ENST00000357811 TMX4Q9H1E5 349 aaPredicted RBP22.35■■□□□ 1.17
COL13A1-202ENST00000357811 GDF3Q9NR23 364 aa22.35■■□□□ 1.17
COL13A1-202ENST00000357811 GOLGA8KD6RF30 607 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 KIF4AO95239 1232 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 ERVK-9P63128 1117 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 PRPF4BQ13523 1007 aaKnown RBP22.34■■□□□ 1.17
COL13A1-202ENST00000357811 SYDE2Q5VT97 1194 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 DAAM2Q86T65 1068 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 GLYCTKQ8IVS8 523 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 SH3GL2Q99962 352 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 EPB41P11171 864 aaKnown RBP22.34■■□□□ 1.17
COL13A1-202ENST00000357811 DPY19L2P1Q6NXN4 242 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 METTL13Q8N6R0 699 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 CHORDC1Q9UHD1 332 aaPredicted RBP22.34■■□□□ 1.17
COL13A1-202ENST00000357811 AMACRQ9UHK6 382 aa22.34■■□□□ 1.17
COL13A1-202ENST00000357811 CYP3A7-CYP3A51PA0A087WV96 503 aa22.33■■□□□ 1.17
COL13A1-202ENST00000357811 CALUO43852 315 aaPredicted RBP22.33■■□□□ 1.17
COL13A1-202ENST00000357811 CYP3A7P24462 503 aa22.33■■□□□ 1.17
COL13A1-202ENST00000357811 EPHA7Q15375 998 aa22.33■■□□□ 1.17
COL13A1-202ENST00000357811 ARHGAP44Q17R89 818 aa22.33■■□□□ 1.17
COL13A1-202ENST00000357811 CEP85LQ5SZL2 805 aa22.33■■□□□ 1.17
COL13A1-202ENST00000357811 PEX26Q7Z412 305 aa22.33■■□□□ 1.17
COL13A1-202ENST00000357811 DYDC2Q96IM9 177 aa22.33■■□□□ 1.17
COL13A1-202ENST00000357811 CELF4Q9BZC1 486 aaKnown RBP22.33■■□□□ 1.17
COL13A1-202ENST00000357811 BCCIPQ9P287 314 aaKnown RBP eCLIP22.33■■□□□ 1.17
COL13A1-202ENST00000357811 GRIN2DO15399 1336 aa22.33■■□□□ 1.17
COL13A1-202ENST00000357811 FAM13AO94988 1023 aa22.33■■□□□ 1.16
COL13A1-202ENST00000357811 GBP6Q6ZN66 633 aa22.33■■□□□ 1.16
COL13A1-202ENST00000357811 CAVIN3Q969G5 261 aa22.33■■□□□ 1.16
COL13A1-202ENST00000357811 RNPC3Q96LT9 517 aaKnown RBP22.33■■□□□ 1.16
COL13A1-202ENST00000357811 TRAF3IP3Q9Y228 551 aa22.33■■□□□ 1.16
COL13A1-202ENST00000357811 PITPNM2Q9BZ72 1349 aa22.33■■□□□ 1.16
COL13A1-202ENST00000357811 LIG3P49916 1009 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 FRMD5Q7Z6J6 570 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 DCAF4Q8WV16 495 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 PIK3R5Q8WYR1 880 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 DDX3XO00571 662 aaKnown RBP eCLIP22.32■■□□□ 1.16
COL13A1-202ENST00000357811 TGFB1I1O43294 461 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 LRRN2O75325 713 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 RINT1Q6NUQ1 792 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 CRYGNQ8WXF5 182 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 SIX2Q9NPC8 291 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 VAV3Q9UKW4 847 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 EIF3HO15372 352 aaKnown RBP eCLIP22.32■■□□□ 1.16
COL13A1-202ENST00000357811 BMP3P12645 472 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 AP3B2Q13367 1082 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 ALS2CLQ60I27 953 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 NAP1L4Q99733 375 aaKnown RBP22.32■■□□□ 1.16
COL13A1-202ENST00000357811 NEUROG2Q9H2A3 272 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 DPH5Q9H2P9 285 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 NYAP2Q9P242 653 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 PLAAQ9Y263 795 aa22.32■■□□□ 1.16
COL13A1-202ENST00000357811 AFF2P51816 1311 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 SART1O43290 800 aaKnown RBP22.31■■□□□ 1.16
COL13A1-202ENST00000357811 SHOX2O60902 331 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-202ENST00000357811 FLT3P36888 993 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 TNNC1P63316 161 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 PPP4R3CPQ6ZMV5 832 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 EPM2AIP1Q7L775 607 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-202ENST00000357811 IQCKQ8N0W5 287 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 ACER1Q8TDN7 264 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 WDR18Q9BV38 432 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 TYW1Q9NV66 732 aaKnown RBP22.31■■□□□ 1.16
COL13A1-202ENST00000357811 SUGT1Q9Y2Z0 365 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 NOC2LQ9Y3T9 749 aaKnown RBP22.31■■□□□ 1.16
COL13A1-202ENST00000357811 KRIT1O00522 736 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 MMP10P09238 476 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 SEC24CP53992 1094 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 GLE1Q53GS7 698 aaKnown RBP22.31■■□□□ 1.16
COL13A1-202ENST00000357811 KIAA1755Q5JYT7 1200 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 AEBP2Q6ZN18 517 aaPredicted RBP22.31■■□□□ 1.16
COL13A1-202ENST00000357811 TPCN2Q8NHX9 752 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 ZDHHC15Q96MV8 337 aa22.31■■□□□ 1.16
COL13A1-202ENST00000357811 SCAF8Q9UPN6 1271 aaKnown RBP22.31■■□□□ 1.16
COL13A1-202ENST00000357811 LTBP4Q8N2S1 1624 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 PDXKO00764 312 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 NDUFAB1O14561 156 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 EVI5O60447 810 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 FLOT1O75955 427 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 H2AFZP0C0S5 128 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 SREBF1P36956 1147 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 H2AFVQ71UI9 128 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 FAM186BQ8IYM0 893 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 MICALL1Q8N3F8 863 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 BANK1Q8NDB2 785 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 PRR12Q9ULL5 1215 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 NR2E1Q9Y466 385 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 CLRN2A0PK11 232 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 TISP43B9A030 160 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 TCP10L2B9ZVM9 353 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 EBAG9O00559 213 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 PACS2Q86VP3 889 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 CSRNP1Q96S65 589 aa22.3■■□□□ 1.16
COL13A1-202ENST00000357811 BACH1O14867 736 aa22.29■■□□□ 1.16
COL13A1-202ENST00000357811 GALCP54803 685 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms