RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 IGSF9BQ9UPX0 1349 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 TTC28Q96AY4 2481 aa12.09□□□□□ -0.47
CAPN3-204ENST00000356316 COL1A2P08123 1366 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 COL4A6Q14031 1691 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 C5orf67F2Z3F1 127 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 RPS6KA5O75582 802 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 SSTR3P32745 418 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 NLRP5P59047 1200 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 PRR16Q569H4 304 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 TCEAL5Q5H9L2 206 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 ZNF746Q6NUN9 644 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 RTN4RL1Q86UN2 441 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 NPAS4Q8IUM7 802 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 METTL13Q8N6R0 699 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 CLP1Q92989 425 aaKnown RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 ZNF689Q96CS4 500 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 PABPC5Q96DU9 382 aaKnown RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 PLVAPQ9BX97 442 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 RNF26Q9BY78 433 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 PCDHB7Q9Y5E2 793 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 PCDHA10Q9Y5I2 948 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 MYH9P35579 1960 aaKnown RBP12.08□□□□□ -0.48
CAPN3-204ENST00000356316 KDM3AQ9Y4C1 1321 aa12.08□□□□□ -0.48
CAPN3-204ENST00000356316 IGLV3-22A0A075B6J6 115 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 CPLX1O14810 134 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 GPR182O15218 404 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
CAPN3-204ENST00000356316 TMOD1P28289 359 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
CAPN3-204ENST00000356316 USP11P51784 963 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 TTC3P53804 2025 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 CCT2P78371 535 aaKnown RBP12.07□□□□□ -0.48
CAPN3-204ENST00000356316 SSRP1Q08945 709 aaKnown RBP12.07□□□□□ -0.48
CAPN3-204ENST00000356316 PKN1Q16512 942 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 TMEM266Q2M3C6 531 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 NAALADL2Q58DX5 795 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 SPOUT1Q5T280 376 aaKnown RBP12.07□□□□□ -0.48
CAPN3-204ENST00000356316 RUFY3Q7L099 469 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 CCDC60Q8IWA6 550 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-204ENST00000356316 CMTR2Q8IYT2 770 aaKnown RBP12.07□□□□□ -0.48
CAPN3-204ENST00000356316 KIAA0319LQ8IZA0 1049 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-204ENST00000356316 CRYGNQ8WXF5 182 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 PPP2R3CQ969Q6 453 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 NRBP2Q9NSY0 501 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 CLDND1Q9NY35 253 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 MAFBQ9Y5Q3 323 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-204ENST00000356316 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
CAPN3-204ENST00000356316 EVPLQ92817 2033 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 H3BQ06 376 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-204ENST00000356316 GRM6O15303 877 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 MAGEB2O15479 319 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 PPFIA3O75145 1194 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 IFNAR1P17181 557 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 SARSP49591 514 aaKnown RBP12.06□□□□□ -0.48
CAPN3-204ENST00000356316 CLCN6P51797 869 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 CRYBB1P53674 252 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-204ENST00000356316 PAN2Q504Q3 1202 aaKnown RBP12.06□□□□□ -0.48
CAPN3-204ENST00000356316 CPLX2Q6PUV4 134 aaKnown RBP12.06□□□□□ -0.48
CAPN3-204ENST00000356316 FAM178BQ8IXR5 827 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 GJD3Q8N144 294 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 NEK9Q8TD19 979 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 P2RX5Q93086 422 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 FAM167AQ96KS9 214 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 AGXT2Q9BYV1 514 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 C22orf23Q9BZE7 217 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 IGFLR1Q9H665 355 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 EPHX3Q9H6B9 360 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 ALG13Q9NP73 1137 aaKnown RBP12.06□□□□□ -0.48
CAPN3-204ENST00000356316 SH3GLB2Q9NR46 395 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 AAASQ9NRG9 546 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 C1orf112Q9NSG2 853 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 VPS54Q9P1Q0 977 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 GABBR1Q9UBS5 961 aa12.06□□□□□ -0.48
CAPN3-204ENST00000356316 NOC2LQ9Y3T9 749 aaKnown RBP12.06□□□□□ -0.48
CAPN3-204ENST00000356316 WDR64B1ANS9 1081 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 EPB41L2O43491 1005 aaKnown RBP12.05□□□□□ -0.48
CAPN3-204ENST00000356316 GAS7O60861 476 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 IL9P15248 144 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 CIITAP33076 1130 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 GSE1Q14687 1217 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 NTRK3Q16288 839 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 TMEM31Q5JXX7 168 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 SLC24A5Q71RS6 500 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 ZNF710Q8N1W2 664 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 RASGRP4Q8TDF6 673 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 MAP7D2Q96T17 732 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 ADAM2Q99965 735 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 CDHR5Q9HBB8 845 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 RC3H2Q9HBD1 1191 aaKnown RBP12.05□□□□□ -0.48
CAPN3-204ENST00000356316 NCOA5Q9HCD5 579 aaKnown RBP12.05□□□□□ -0.48
CAPN3-204ENST00000356316 ZSWIM6Q9HCJ5 1215 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 DISC1Q9NRI5 854 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 RGS18Q9NS28 235 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 ST3GAL5Q9UNP4 418 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 PLAGL2Q9UPG8 496 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms