RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 PIDD1Q9HB75 910 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 PACSIN2Q9UNF0 486 aaPredicted RBP10.21□□□□□ -0.77
SMG6-202ENST00000354901 SIK3Q9Y2K2 1263 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 GMNCA6NCL1 334 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 ZNF233A6NK53 670 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 PPP1R11O60927 126 aaPredicted RBP10.21□□□□□ -0.77
SMG6-202ENST00000354901 PCK1P35558 622 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 SLC8A3P57103 927 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 POLR2FP61218 127 aaKnown RBP10.21□□□□□ -0.77
SMG6-202ENST00000354901 TAF11Q15544 211 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 MIS18BP1Q6P0N0 1132 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 KSR1Q8IVT5 923 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 TBC1D16Q8TBP0 767 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 HOOK2Q96ED9 719 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 ZNF570Q96NI8 536 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 TSG101Q99816 390 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 CCDC113Q9H0I3 377 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 RIOX1Q9H6W3 641 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 JMJD4Q9H9V9 463 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 PRDM16Q9HAZ2 1276 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 LRRC4BQ9NT99 713 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 STIM2Q9P246 746 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 PCDHA12Q9UN75 941 aa10.21□□□□□ -0.77
SMG6-202ENST00000354901 TNRC6CQ9HCJ0 1690 aaKnown RBP10.21□□□□□ -0.78
SMG6-202ENST00000354901 POTEB3A0JP26 581 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 A8MUI8 341 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 POTECB2RU33 542 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 G3V3G9 751 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 PAPOLAP51003 745 aaKnown RBP10.21□□□□□ -0.78
SMG6-202ENST00000354901 COASYQ13057 564 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 RAPGEF1Q13905 1077 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 TRADDQ15628 312 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 HERC4Q5GLZ8 1057 aaPredicted RBP10.21□□□□□ -0.78
SMG6-202ENST00000354901 DCAF8Q5TAQ9 597 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 HHATQ5VTY9 493 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 CDCA2Q69YH5 1023 aaPredicted RBP10.21□□□□□ -0.78
SMG6-202ENST00000354901 POTEBQ6S5H4 581 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 C15orf52Q6ZUT6 534 aaKnown RBP10.21□□□□□ -0.78
SMG6-202ENST00000354901 KLHL7Q8IXQ5 586 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 MYOCDQ8IZQ8 938 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 MDM1Q8TC05 714 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 EZH1Q92800 747 aaPredicted RBP10.21□□□□□ -0.78
SMG6-202ENST00000354901 SELENOSQ9BQE4 189 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 USP40Q9NVE5 1235 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 PANK4Q9NVE7 773 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 PLAAQ9Y263 795 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 CD2APQ9Y5K6 639 aa10.21□□□□□ -0.78
SMG6-202ENST00000354901 MEIS1O00470 390 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 ATP2B4P23634 1241 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 PAFAH1B1P43034 410 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 SKOR1P84550 965 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 IKQ13123 557 aaPredicted RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 FAM26FQ5R3K3 315 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 GKAP1Q5VSY0 366 aaPredicted RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 ZSCAN29Q8IWY8 852 aaPredicted RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 GUF1Q8N442 669 aaKnown RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 MTMR8Q96EF0 704 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 LSM14BQ9BX40 385 aaKnown RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 SH2D4AQ9H788 454 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 STK17AQ9UEE5 414 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 SNX12Q9UMY4 172 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 TARSL2A2RTX5 802 aaKnown RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 HEXIM1O94992 359 aaKnown RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 FTCDO95954 541 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 EPS15P42566 896 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 TBC1D25Q3MII6 688 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 KIAA0825Q8IV33 1275 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 UBLCP1Q8WVY7 318 aaPredicted RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 OSBPL9Q96SU4 736 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 TRIM4Q9C037 500 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 PSTPIP2Q9H939 334 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 NOP53Q9NZM5 478 aaKnown RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 ZNF219Q9P2Y4 722 aaPredicted RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 NRXN2Q9P2S2 1712 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 IFNAR2P48551 515 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 NT5C2P49902 561 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 LRRC55Q6ZSA7 311 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 GPBP1Q86WP2 473 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 CREG2Q8IUH2 290 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 SPATA4Q8NEY3 305 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 DYDC1Q8WWB3 177 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 HAS1Q92839 578 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 ALS2CR12Q96Q35 445 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
SMG6-202ENST00000354901 SERPINB13Q9UIV8 391 aa10.2□□□□□ -0.78
SMG6-202ENST00000354901 NFIAQ12857 509 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 PDCD2Q16342 344 aaPredicted RBP10.19□□□□□ -0.78
SMG6-202ENST00000354901 ASPRV1Q53RT3 343 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 SLC30A10Q6XR72 485 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 KDM7AQ6ZMT4 941 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 CCDC84Q86UT8 332 aaPredicted RBP10.19□□□□□ -0.78
SMG6-202ENST00000354901 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 SYCP3Q8IZU3 236 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 GOLPH3Q9H4A6 298 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 LMCD1Q9NZU5 365 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 NOVA2Q9UNW9 492 aaKnown RBP10.19□□□□□ -0.78
SMG6-202ENST00000354901 PCDHAC2Q9Y5I4 1007 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 MYH1P12882 1939 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 SRCAPQ6ZRS2 3230 aa10.19□□□□□ -0.78
SMG6-202ENST00000354901 PVALEFA0A1B0GWK0 134 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms