RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 RINLQ6ZS11 566 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 EXOC4Q96A65 974 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 PPP1R16BQ96T49 567 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 C11orf16Q9NQ32 467 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 SPATA6Q9NWH7 488 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 BLOC1S6Q9UL45 172 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 EXOC6BQ9Y2D4 811 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 ZDHHC9Q9Y397 364 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 PTGES3LE9PB15 166 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 SLC16A5O15375 505 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 ACTN4O43707 911 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 EFCAB14O75071 495 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 CIB2O75838 187 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 S1PR4O95977 384 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 IGFALSP35858 605 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 CAPZA2P47755 286 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 SPIRE1Q08AE8 756 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 MUM1L1Q5H9M0 696 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 IZUMO3Q5VZ72 239 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 ICE2Q659A1 982 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 TTC6Q86TZ1 520 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 SLC4A11Q8NBS3 891 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 EDC3Q96F86 508 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 MPHOSPH8Q99549 860 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 HMG20BQ9P0W2 317 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 TELO2Q9Y4R8 837 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 ATP10BO94823 1461 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 ADGRF5Q8IZF2 1346 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 PEX12O00623 359 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 ONECUT3O60422 494 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 EIF4EBP3O60516 100 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 GSTM1P09488 218 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 STMN1P16949 149 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 TNFAIP3P21580 790 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 GJA5P36382 358 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 VPS41P49754 854 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 BFSP2Q13515 415 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 SEPT7Q16181 437 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 LETM2Q2VYF4 491 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 FAM160B1Q5W0V3 765 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 CASC4Q6P4E1 433 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 CWC27Q6UX04 472 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 GBP6Q6ZN66 633 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 LRRTM3Q86VH5 581 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 C12orf40Q86WS4 652 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 ZNF511Q8NB15 262 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 ST13P5Q8NFI4 369 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 RFWD2Q8NHY2 731 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 TBC1D22AQ8WUA7 517 aa6.49□□□□□ -1.37
RFC1-201ENST00000349703 MRPS27Q92552 414 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 IFIH1Q9BYX4 1025 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 C14orf93Q9H972 538 aaKnown RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 CWC25Q9NXE8 425 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 ORC3Q9UBD5 711 aaPredicted RBP6.49□□□□□ -1.37
RFC1-201ENST00000349703 PIK3R4Q99570 1358 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 POM121BA6NF01 834 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 SH2D7A6NKC9 451 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 DDX3YO15523 660 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 CCNT2O60583 730 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 ZIC2O95409 532 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 KRT5P13647 590 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 POU1F1P28069 291 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 PIK3CAP42336 1068 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 MNAT1P51948 309 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 EVCP57679 992 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 FILIP1LQ4L180 1135 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 DESI2Q9BSY9 194 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 MMADHCQ9H3L0 296 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 PPANQ9NQ55 473 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 SUCOQ9UBS9 1254 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 GPR55Q9Y2T6 319 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 MTO1Q9Y2Z2 717 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 IQGAP1P46940 1657 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 MYO5CQ9NQX4 1742 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 USP1O94782 785 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 WEE2P0C1S8 567 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 MARCKSP29966 332 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 PTPN7P35236 360 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 PTGER2P43116 358 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 HSP90AA4PQ58FG1 418 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 COX20Q5RI15 118 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 PRPF40BQ6NWY9 871 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 ADCK2Q7Z695 626 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 POTEDQ86YR6 584 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 CCDC148Q8NFR7 591 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 HS6ST2Q96MM7 605 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 CRACR2AQ9BSW2 395 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 FAM114A2Q9NRY5 505 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 SRPK3Q9UPE1 567 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 APOBEC2Q9Y235 224 aaKnown RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 AP1M2Q9Y6Q5 423 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 PHLPP2Q6ZVD8 1323 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 A0A1W2PRU2 124 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 FAM47E-STBD1D6RA91 191 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 PMM2O15305 246 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 ADH1BP00325 375 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 COL9A1P20849 921 aa6.48□□□□□ -1.37
RFC1-201ENST00000349703 ADSLP30566 484 aaPredicted RBP6.48□□□□□ -1.37
RFC1-201ENST00000349703 GSTM5P46439 218 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms