RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 RABEP2Q9H5N1 569 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 EHMT1Q9H9B1 1298 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 GGA3Q9NZ52 723 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 CWC15Q9P013 229 aaKnown RBP15.24■□□□□ 0.03
TRIM4-201ENST00000349062 LRRC37AA6NMS7 1700 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 MYH10P35580 1976 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 MYO1CO00159 1063 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 N4BP1O75113 896 aaKnown RBP15.24■□□□□ 0.03
TRIM4-201ENST00000349062 SNRNP48Q6IEG0 339 aaKnown RBP15.24■□□□□ 0.03
TRIM4-201ENST00000349062 NFRKBQ6P4R8 1299 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 GPR161Q8N6U8 529 aaKnown RBP15.24■□□□□ 0.03
TRIM4-201ENST00000349062 TRPM4Q8TD43 1214 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 PNKPQ96T60 521 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 PARVGQ9HBI0 331 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 TELO2Q9Y4R8 837 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 SAR1BQ9Y6B6 198 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 CYP3A7-CYP3A51PA0A087WV96 503 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 HIP1RO75146 1068 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 EPB41P11171 864 aaKnown RBP15.24■□□□□ 0.03
TRIM4-201ENST00000349062 CYP3A7P24462 503 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 CCDC181Q5TID7 509 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 BTNL9Q6UXG8 535 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 RNF207Q6ZRF8 634 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 CCDC127Q96BQ5 260 aa15.24■□□□□ 0.03
TRIM4-201ENST00000349062 EYA4O95677 639 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 HOXD13P35453 343 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 TNFAIP1Q13829 316 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 EXOC3L4Q17RC7 722 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 SLC9C1Q4G0N8 1177 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 HSP90B2PQ58FF3 399 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 XKR9Q5GH70 373 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 TTYH3Q9C0H2 523 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 RANBP17Q9H2T7 1088 aaKnown RBP15.23■□□□□ 0.03
TRIM4-201ENST00000349062 GCNT4Q9P109 453 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 H3BQF6 201 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 SLC7A5Q01650 507 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 PADI6Q6TGC4 694 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 HS2ST1Q7LGA3 356 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 FAM160B2Q86V87 743 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 KCTD10Q9H3F6 313 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 RNF146Q9NTX7 359 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 CHORDC1Q9UHD1 332 aaPredicted RBP15.23■□□□□ 0.03
TRIM4-201ENST00000349062 HYOU1Q9Y4L1 999 aa15.23■□□□□ 0.03
TRIM4-201ENST00000349062 CALUO43852 315 aaPredicted RBP15.22■□□□□ 0.03
TRIM4-201ENST00000349062 ZBED4O75132 1171 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 GFPT2O94808 682 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 TUBB4AP04350 444 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 KIAA0753Q2KHM9 967 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 ZSWIM2Q8NEG5 633 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 PAGR1Q9BTK6 254 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 ZNF541Q9H0D2 1346 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 BACH1O14867 736 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 SLC16A4O15374 487 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 PSMD10O75832 226 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 ABCB4P21439 1286 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 PEX3P56589 373 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 LLGL1Q15334 1064 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 ASIC2Q16515 512 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 FAM186BQ8IYM0 893 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 MS4A14Q96JA4 679 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 SALL4Q9UJQ4 1053 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 PCDHA2Q9Y5H9 948 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 PDXDC1Q6P996 788 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 CEP112Q8N8E3 955 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 ZNF668Q96K58 619 aaPredicted RBP15.22■□□□□ 0.03
TRIM4-201ENST00000349062 MXRA8Q9BRK3 442 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 PLAGL2Q9UPG8 496 aa15.22■□□□□ 0.03
TRIM4-201ENST00000349062 TACC1O75410 805 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 ICAM1P05362 532 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 EHHADHQ08426 723 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 ZCWPW2Q504Y3 356 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 IPO4Q8TEX9 1081 aaKnown RBP15.21■□□□□ 0.03
TRIM4-201ENST00000349062 COG1Q8WTW3 980 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 CRYGNQ8WXF5 182 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 NACC1Q96RE7 527 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 HSD17B14Q9BPX1 270 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 A0A087X0T9 212 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 NPM3O75607 178 aaKnown RBP15.21■□□□□ 0.03
TRIM4-201ENST00000349062 AFPP02771 609 aaKnown RBP15.21■□□□□ 0.03
TRIM4-201ENST00000349062 FAM228BP0C875 321 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 VAV2P52735 878 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 ITGB3BPQ13352 177 aaPredicted RBP15.21■□□□□ 0.03
TRIM4-201ENST00000349062 UGCGQ16739 394 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 FOXR1Q6PIV2 292 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 FAM83AQ86UY5 434 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 SYTL5Q8TDW5 730 aaPredicted RBP15.21■□□□□ 0.03
TRIM4-201ENST00000349062 FAN1Q9Y2M0 1017 aa15.21■□□□□ 0.03
TRIM4-201ENST00000349062 ZNF536O15090 1300 aa15.21■□□□□ 0.02
TRIM4-201ENST00000349062 TLR2O60603 784 aa15.21■□□□□ 0.02
TRIM4-201ENST00000349062 HARSP12081 509 aaKnown RBP15.21■□□□□ 0.02
TRIM4-201ENST00000349062 TRIM59Q8IWR1 403 aa15.21■□□□□ 0.02
TRIM4-201ENST00000349062 RETREG2Q8NC44 543 aa15.21■□□□□ 0.02
TRIM4-201ENST00000349062 FUT8Q9BYC5 575 aa15.21■□□□□ 0.02
TRIM4-201ENST00000349062 PHF20L1A8MW92 1017 aa15.2■□□□□ 0.02
TRIM4-201ENST00000349062 VSNL1P62760 191 aa15.2■□□□□ 0.02
TRIM4-201ENST00000349062 MRPS9P82933 396 aaKnown RBP15.2■□□□□ 0.02
TRIM4-201ENST00000349062 TKFCQ3LXA3 575 aa15.2■□□□□ 0.02
TRIM4-201ENST00000349062 BAP1Q92560 729 aa15.2■□□□□ 0.02
TRIM4-201ENST00000349062 SAAL1Q96ER3 474 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms