RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 KCNJ2P63252 427 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 GRB10Q13322 594 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 TMED8Q6PL24 325 aaPredicted RBP20.3■□□□□ 0.84
SCARF1-202ENST00000348987 LRRC34Q8IZ02 419 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 REXO1Q8N1G1 1221 aaKnown RBP20.3■□□□□ 0.84
SCARF1-202ENST00000348987 PARD3BQ8TEW8 1205 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 MTFR1LQ9H019 292 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 NOP53Q9NZM5 478 aaKnown RBP20.3■□□□□ 0.84
SCARF1-202ENST00000348987 GGT7Q9UJ14 662 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 ATP8A1Q9Y2Q0 1164 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 MYMKA6NI61 221 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 KIF4AO95239 1232 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 ITGA4P13612 1032 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 POLR2FP61218 127 aaKnown RBP20.3■□□□□ 0.84
SCARF1-202ENST00000348987 MIS18BP1Q6P0N0 1132 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 PIGWQ7Z7B1 504 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 CCHCR1Q8TD31 782 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 TLCD1Q96CP7 247 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 UIMC1Q96RL1 719 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 SELENOSQ9BQE4 189 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 LZTS2Q9BRK4 669 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 DPH5Q9H2P9 285 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 CUEDC2Q9H467 287 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 SEC63Q9UGP8 760 aaKnown RBP20.3■□□□□ 0.84
SCARF1-202ENST00000348987 ATP6V0A2Q9Y487 856 aa20.3■□□□□ 0.84
SCARF1-202ENST00000348987 AFF2P51816 1311 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 GPR75-ASB3A0A0A6YYF3 556 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 SMNDC1O75940 238 aaKnown RBP eCLIP20.29■□□□□ 0.84
SCARF1-202ENST00000348987 NOL4O94818 638 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 LDHCP07864 332 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 GNA11P29992 359 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 ZNF268Q14587 947 aaPredicted RBP20.29■□□□□ 0.84
SCARF1-202ENST00000348987 TRPM8Q7Z2W7 1104 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 DNAAF5Q86Y56 855 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 LRRC47Q8N1G4 583 aaKnown RBP20.29■□□□□ 0.84
SCARF1-202ENST00000348987 PRCCQ92733 491 aaPredicted RBP20.29■□□□□ 0.84
SCARF1-202ENST00000348987 CENPTQ96BT3 561 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 ZBTB10Q96DT7 871 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 SH3GL3Q99963 347 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 CELF4Q9BZC1 486 aaKnown RBP20.29■□□□□ 0.84
SCARF1-202ENST00000348987 KRIT1O00522 736 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 TTI1O43156 1089 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 MFSD14BQ5SR56 506 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 SOGA3Q5TF21 947 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 RPGRQ92834 1020 aaKnown RBP20.29■□□□□ 0.84
SCARF1-202ENST00000348987 TRIM31Q9BZY9 425 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 KCNMB3Q9NPA1 279 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 ABCF3Q9NUQ8 709 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 COL24A1Q17RW2 1714 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 SBF2Q86WG5 1849 aa20.29■□□□□ 0.84
SCARF1-202ENST00000348987 BHMG1C9JSJ3 638 aaPredicted RBP20.28■□□□□ 0.84
SCARF1-202ENST00000348987 ASAP2O43150 1006 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 ITIH4Q14624 930 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 KCNK18Q7Z418 384 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 ACTRT1Q8TDG2 376 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 PNMA5Q96PV4 448 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 CEP72Q9P209 647 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 NOC2LQ9Y3T9 749 aaKnown RBP20.28■□□□□ 0.84
SCARF1-202ENST00000348987 ZNF831Q5JPB2 1677 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 CFAP73A6NFT4 308 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 GYS1P13807 737 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 RAPGEF1Q13905 1077 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 AP1ARQ63HQ0 302 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 MTMR9Q96QG7 549 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 EDEM3Q9BZQ6 932 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 MAGEF1Q9HAY2 307 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 SAMD15Q9P1V8 674 aa20.28■□□□□ 0.84
SCARF1-202ENST00000348987 KLHL33A6NCF5 533 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 PGRMC1O00264 195 aaKnown RBP20.27■□□□□ 0.84
SCARF1-202ENST00000348987 SHBGP04278 402 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 SLURP2P0DP57 97 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 ICA1Q05084 483 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 SPICE1Q8N0Z3 855 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 FAM133AQ8N9E0 248 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 SPDYE1Q8NFV5 336 aaPredicted RBP20.27■□□□□ 0.84
SCARF1-202ENST00000348987 ATXN2LQ8WWM7 1075 aaKnown RBP20.27■□□□□ 0.84
SCARF1-202ENST00000348987 DDX60LQ5H9U9 1706 aaKnown RBP20.27■□□□□ 0.84
SCARF1-202ENST00000348987 ALDH5A1P51649 535 aaPredicted RBP20.27■□□□□ 0.84
SCARF1-202ENST00000348987 USP11P51784 963 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 AMPD3Q01432 767 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 PICALMQ13492 652 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 LRRC41Q15345 812 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 METTL13Q8N6R0 699 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 PBKQ96KB5 322 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 LSM14BQ9BX40 385 aaKnown RBP20.27■□□□□ 0.84
SCARF1-202ENST00000348987 YIPF3Q9GZM5 350 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 KANSL2Q9H9L4 492 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 SLC5A4Q9NY91 659 aa20.27■□□□□ 0.84
SCARF1-202ENST00000348987 A8MUI8 341 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 CES2O00748 559 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 SERPINB2P05120 415 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 VIMP08670 466 aaKnown RBP20.26■□□□□ 0.83
SCARF1-202ENST00000348987 NQO1P15559 274 aaKnown RBP20.26■□□□□ 0.83
SCARF1-202ENST00000348987 ADCY2Q08462 1091 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 CALCRLQ16602 461 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 LRRC55Q6ZSA7 311 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 CALML4Q96GE6 196 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 PRMT1Q99873 361 aaKnown RBP20.26■□□□□ 0.83
SCARF1-202ENST00000348987 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.26■□□□□ 0.832e-6■■□□□ 13.2
SCARF1-202ENST00000348987 ZNF287Q9HBT7 754 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms