RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 LMNTD2Q8IXW0 634 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 MYOCDQ8IZQ8 938 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 DDX12PQ92771 950 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 BLOC1S4Q9NUP1 217 aa16.64■□□□□ 0.25
LMNA-201ENST00000347559 CREB1P16220 341 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 PRPHP41219 470 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 C6orf118Q5T5N4 469 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 ERP44Q9BS26 406 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 RASGRF2O14827 1237 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 AGTP01019 485 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 GOLGA8HP0CJ92 632 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 GRB10Q13322 594 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 GALNTL6Q49A17 601 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 CNBD1Q8NA66 436 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 DDX17Q92841 729 aaKnown RBP16.63■□□□□ 0.25
LMNA-201ENST00000347559 RMDN2Q96LZ7 410 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 ABCB11O95342 1321 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 BHMG1C9JSJ3 638 aaPredicted RBP16.63■□□□□ 0.25
LMNA-201ENST00000347559 LAD1O00515 517 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 PDE8AO60658 829 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 NUDT17P0C025 328 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 SLC9A1P19634 815 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 GBP1P32455 592 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 LONP2Q86WA8 852 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 U2AF1L4Q8WU68 220 aaKnown RBP16.63■□□□□ 0.25
LMNA-201ENST00000347559 UIMC1Q96RL1 719 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 ERVK-5Q9HDB9 667 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 AIPL1Q9NZN9 384 aa16.63■□□□□ 0.25
LMNA-201ENST00000347559 RTCBQ9Y3I0 505 aaKnown RBP16.63■□□□□ 0.25
LMNA-201ENST00000347559 H2AFZP0C0S5 128 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 POLE2P56282 527 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 CACNB1Q02641 598 aaPredicted RBP16.62■□□□□ 0.25
LMNA-201ENST00000347559 H2AFVQ71UI9 128 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 SPATA21Q7Z572 469 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 GBP7Q8N8V2 638 aaPredicted RBP16.62■□□□□ 0.25
LMNA-201ENST00000347559 TXLNGYQ9BZA5 131 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 ZHX3Q9H4I2 956 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 AMFRQ9UKV5 643 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 POTEMA6NI47 508 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 MKRN4PQ13434 485 aaPredicted RBP16.62■□□□□ 0.25
LMNA-201ENST00000347559 TMEM154Q6P9G4 183 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 PNMA1Q8ND90 353 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 SYT15Q9BQS2 421 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 DDX23Q9BUQ8 820 aaKnown RBP16.62■□□□□ 0.25
LMNA-201ENST00000347559 TRIM7Q9C029 511 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 OSGEPQ9NPF4 335 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 ZDHHC18Q9NUE0 388 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 ARL2BPQ9Y2Y0 163 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 C2CD2Q9Y426 696 aa16.62■□□□□ 0.25
LMNA-201ENST00000347559 ABCB4P21439 1286 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 NAPAP54920 295 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 LONRF1Q17RB8 773 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 BARGINQ6ZT62 677 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 TAOK1Q7L7X3 1001 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 NT5DC3Q86UY8 548 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 KSR1Q8IVT5 923 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 RIOK1Q9BRS2 568 aaKnown RBP16.61■□□□□ 0.25
LMNA-201ENST00000347559 FGFBP2Q9BYJ0 223 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 NUP188Q5SRE5 1749 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 PVALEFA0A1B0GWK0 134 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 TMEM120BA0PK00 339 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 M0R2N6 131 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 LGR5O75473 907 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 RTN3O95197 1032 aaPredicted RBP16.61■□□□□ 0.25
LMNA-201ENST00000347559 PPP1R15BQ5SWA1 713 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 DUPD1Q68J44 220 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 SEC14L1Q92503 715 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 RPS6KC1Q96S38 1066 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 LBHD1Q9BQE6 289 aaPredicted RBP16.61■□□□□ 0.25
LMNA-201ENST00000347559 VAT1LQ9HCJ6 419 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
LMNA-201ENST00000347559 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 A0A1B0GVG6 124 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 GYG1P46976 350 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 RBM5P52756 815 aaKnown RBP eCLIP16.61■□□□□ 0.25
LMNA-201ENST00000347559 SESN3P58005 492 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 ROR2Q01974 943 aaKnown RBP16.61■□□□□ 0.25
LMNA-201ENST00000347559 KLRC3Q07444 240 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 LAMB3Q13751 1172 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 NONOQ15233 471 aaKnown RBP eCLIP16.61■□□□□ 0.25
LMNA-201ENST00000347559 KIAA1755Q5JYT7 1200 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 KCNK18Q7Z418 384 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 IRF2BP2Q7Z5L9 587 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 JAMLQ86YT9 394 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 MFN1Q8IWA4 741 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 RASGEF1CQ8N431 466 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 TEX9Q8N6V9 391 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 TMEM237Q96Q45 408 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 NUDT12Q9BQG2 462 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 RIC8AQ9NPQ8 531 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 DLGAP2Q9P1A6 1054 aa16.61■□□□□ 0.25
LMNA-201ENST00000347559 SUCLA2Q9P2R7 463 aaPredicted RBP16.61■□□□□ 0.25
LMNA-201ENST00000347559 FLOT1O75955 427 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 POU5F1Q01860 360 aaKnown RBP16.6■□□□□ 0.25
LMNA-201ENST00000347559 KCNH2Q12809 1159 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 AUHQ13825 339 aaKnown RBP16.6■□□□□ 0.25
LMNA-201ENST00000347559 COBLL1Q53SF7 1204 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 RNF220Q5VTB9 566 aa16.6■□□□□ 0.25
LMNA-201ENST00000347559 AADACL2Q6P093 401 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms