RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 AFAP1L1Q8TED9 768 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 SCFD2Q8WU76 684 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 SCFD1Q8WVM8 642 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 TINF2Q9BSI4 451 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 TIPINQ9BVW5 301 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 STRA6Q9BX79 667 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 SRRTQ9BXP5 876 aaKnown RBP12.17□□□□□ -0.46
ECM1-201ENST00000346569 XPO4Q9C0E2 1151 aaKnown RBP12.17□□□□□ -0.46
ECM1-201ENST00000346569 KCTD10Q9H3F6 313 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 MLXIPQ9HAP2 919 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 TBC1D7Q9P0N9 293 aa12.17□□□□□ -0.46
ECM1-201ENST00000346569 LRRC37A2A6NM11 1700 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 BACH1O14867 736 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 HIP1RO75146 1068 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 LGR5O75473 907 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 FAM13AO94988 1023 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 HOXD13P35453 343 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 SP4Q02446 784 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 NOGQ13253 232 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 IRF5Q13568 498 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 NR1I3Q14994 352 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 TPD52L1Q16890 204 aaPredicted RBP12.16□□□□□ -0.46
ECM1-201ENST00000346569 BMT2Q1RMZ1 405 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 HSDL1Q3SXM5 330 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 XKR9Q5GH70 373 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 UTP14CQ5TAP6 766 aaKnown RBP12.16□□□□□ -0.46
ECM1-201ENST00000346569 ZNF720Q7Z2F6 126 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 DHX37Q8IY37 1157 aaKnown RBP12.16□□□□□ -0.46
ECM1-201ENST00000346569 NOC3LQ8WTT2 800 aaKnown RBP12.16□□□□□ -0.46
ECM1-201ENST00000346569 COPS5Q92905 334 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 CEP89Q96ST8 783 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 GPR20Q99678 358 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 NIFKQ9BYG3 293 aaKnown RBP12.16□□□□□ -0.46
ECM1-201ENST00000346569 THAP9Q9H5L6 903 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 PARVGQ9HBI0 331 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 ZNF302Q9NR11 478 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 SLC5A4Q9NY91 659 aa12.16□□□□□ -0.46
ECM1-201ENST00000346569 LIMA1Q9UHB6 759 aaKnown RBP12.16□□□□□ -0.46
ECM1-201ENST00000346569 A0A1B0GTH6 734 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 KIF20AO95235 890 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 SERPINC1P01008 464 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 MAPTP10636 758 aaKnown RBP12.15□□□□□ -0.46
ECM1-201ENST00000346569 CASP5P51878 434 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 LRRC63Q05C16 580 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 HSP90AA4PQ58FG1 418 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 TCP11X2Q5H9J9 407 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 PLPPR4Q7Z2D5 763 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 REM2Q8IYK8 340 aaPredicted RBP12.15□□□□□ -0.46
ECM1-201ENST00000346569 MYCT1Q8N699 235 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 EMID1Q96A84 441 aaPredicted RBP12.15□□□□□ -0.46
ECM1-201ENST00000346569 SH2D3AQ9BRG2 576 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 ABHD16BQ9H3Z7 469 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 ZHX3Q9H4I2 956 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 INTS13Q9NVM9 706 aa12.15□□□□□ -0.46
ECM1-201ENST00000346569 DOCK3Q8IZD9 2030 aa12.15□□□□□ -0.47
ECM1-201ENST00000346569 PLXNB2O15031 1838 aa12.15□□□□□ -0.47
ECM1-201ENST00000346569 DOCK5Q9H7D0 1870 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 EIF3DO15371 548 aaKnown RBP eCLIP12.14□□□□□ -0.47
ECM1-201ENST00000346569 CBFA2T2O43439 604 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 AOC2O75106 756 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 TBCAO75347 108 aaKnown RBP12.14□□□□□ -0.47
ECM1-201ENST00000346569 MYBP10242 640 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 CTGFP29279 349 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 TCF7P36402 384 aaPredicted RBP12.14□□□□□ -0.47
ECM1-201ENST00000346569 STAT5BP51692 787 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 PRKCEQ02156 737 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 SPAG1Q07617 926 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 ARHGAP1Q07960 439 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 ACVR2BQ13705 512 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 LAMC2Q13753 1193 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 TARBP2Q15633 366 aaKnown RBP12.14□□□□□ -0.47
ECM1-201ENST00000346569 PLA2G4FQ68DD2 849 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 IQSEC1Q6DN90 963 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 ZC3H3Q8IXZ2 948 aaKnown RBP12.14□□□□□ -0.47
ECM1-201ENST00000346569 CSGALNACT2Q8N6G5 542 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 CEP170P1Q96L14 293 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 CAPNS2Q96L46 248 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 TRIM47Q96LD4 638 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 NTPCRQ9BSD7 190 aaKnown RBP12.14□□□□□ -0.47
ECM1-201ENST00000346569 XPNPEP1Q9NQW7 623 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 CYP26B1Q9NR63 512 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 NRBP2Q9NSY0 501 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 WBP1LQ9NX94 342 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 NRBP1Q9UHY1 535 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 TRAF3IP3Q9Y228 551 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 PLXNA1Q9UIW2 1896 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 WDR81Q562E7 1941 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 MCM3APO60318 1980 aa12.14□□□□□ -0.47
ECM1-201ENST00000346569 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 PDXKO00764 312 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 USO1O60763 962 aaKnown RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 PPP1R37O75864 691 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 DGAT1O75907 488 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 PRPF6O94906 941 aaKnown RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 OATP04181 439 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 PLS3P13797 630 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 NMT1P30419 496 aaKnown RBP12.13□□□□□ -0.47
ECM1-201ENST00000346569 ADCYAP1R1P41586 468 aa12.13□□□□□ -0.47
ECM1-201ENST00000346569 KRT31Q15323 416 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms