RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CDX2Q99626 313 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 JPH2Q9BR39 696 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 TTYH1Q9H313 450 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 SEPT9Q9UHD8 586 aaPredicted RBP17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 PCDHA12Q9UN75 941 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 GINS2Q9Y248 185 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 GTF3C3Q9Y5Q9 886 aa17.72■□□□□ 0.43
TSPAN4-201ENST00000346501 TET1Q8NFU7 2136 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 P4HBP07237 508 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 FOSL2P15408 326 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 ATP2B1P20020 1258 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 ATP4AP20648 1035 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 QARSP47897 775 aaKnown RBP17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 MGAT3Q09327 533 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 FBXO47Q5MNV8 452 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 NCAPH2Q6IBW4 605 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 RAD9AQ99638 391 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 FTHL17Q9BXU8 183 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 RNF216Q9NWF9 866 aaPredicted RBP17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 AKT3Q9Y243 479 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 INSL6Q9Y581 213 aa17.71■□□□□ 0.43
TSPAN4-201ENST00000346501 DDX11L8A8MPP1 907 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 H3BQV1 296 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 C22orf31O95567 290 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 CDC42EP1Q00587 391 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 TMEM62Q0P6H9 643 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 PAK2Q13177 524 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 ORC2Q13416 577 aaPredicted RBP17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 LPIN1Q14693 890 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 EPHA7Q15375 998 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 EARS2Q5JPH6 523 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 EFCAB12Q6NXP0 572 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 OTUD6AQ7L8S5 288 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 ZBTB10Q96DT7 871 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 SCLT1Q96NL6 688 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 SUGCTQ9HAC7 445 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 SMC3Q9UQE7 1217 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 YBX2Q9Y2T7 364 aaKnown RBP17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 KDM3AQ9Y4C1 1321 aa17.7■□□□□ 0.42
TSPAN4-201ENST00000346501 FAM205CA6NFA0 338 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 ZNF862O60290 1169 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 GJB5O95377 273 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 CA3P07451 260 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 MCM7P33993 719 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 DEFB103AP81534 67 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 MTERF2Q49AM1 385 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 FAM117BQ6P1L5 589 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 B3GNT9Q6UX72 402 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 NOSTRINQ8IVI9 506 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 KIAA0319LQ8IZA0 1049 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 BANK1Q8NDB2 785 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 CCDC43Q96MW1 224 aaKnown RBP17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 GUCD1Q96NT3 240 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 BACH2Q9BYV9 841 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 TTC12Q9H892 705 aaPredicted RBP17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 PPME1Q9Y570 386 aa17.69■□□□□ 0.42
TSPAN4-201ENST00000346501 GPR182O15218 404 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 RPS6KA5O75582 802 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 TXKP42681 527 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 TRAPPC10P48553 1259 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 GRIN2CQ14957 1233 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 UGCGQ16739 394 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 MCTP1Q6DN14 999 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 NEK9Q8TD19 979 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 MYLIPQ8WY64 445 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 HAS1Q92839 578 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 YME1L1Q96TA2 773 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 NIFKQ9BYG3 293 aaKnown RBP17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 ZSWIM4Q9H7M6 989 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 VAV3Q9UKW4 847 aa17.68■□□□□ 0.42
TSPAN4-201ENST00000346501 ZBTB42B2RXF5 422 aa17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 UPP2O95045 317 aa17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 MYOGP15173 224 aa17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 CD52P31358 61 aa17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 CLCN3P51790 818 aa17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 CRYBB1P53674 252 aaPredicted RBP17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 NFX1Q12986 1120 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 TMEM266Q2M3C6 531 aa17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 ERMNQ8TAM6 284 aa17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 SLC7A3Q8WY07 619 aa17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 PRDM12Q9H4Q4 367 aa17.67■□□□□ 0.42
TSPAN4-201ENST00000346501 EML1O00423 815 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 GTPBP6O43824 516 aaPredicted RBP17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 VTNP04004 478 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 STAG3L1P0CL83 205 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 IGFBP4P22692 258 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 GJB2P29033 226 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 KIZQ2M2Z5 673 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 TTC38Q5R3I4 469 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 TPH2Q8IWU9 490 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 C4orf19Q8IY42 314 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 TOP1MTQ969P6 601 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 CEP170P1Q96L14 293 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 LXNQ9BS40 222 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 PADI3Q9ULW8 664 aa17.66■□□□□ 0.42
TSPAN4-201ENST00000346501 DENND3A2RUS2 1198 aa17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 POLGP54098 1239 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 NLRP11P59045 1033 aaKnown RBP17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 ZNF174Q15697 407 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms