RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 RUSC1Q9BVN2 902 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 ZHX3Q9H4I2 956 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 TAB2Q9NYJ8 693 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 ERICH4A6NGS2 130 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 QARSP47897 775 aaKnown RBP14.13□□□□□ -0.15
CLK3-201ENST00000345005 CACNB1Q02641 598 aaPredicted RBP14.13□□□□□ -0.15
CLK3-201ENST00000345005 MOGSQ13724 837 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 MAP1SQ66K74 1059 aaPredicted RBP14.13□□□□□ -0.15
CLK3-201ENST00000345005 C1orf186Q6ZWK4 172 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 HDXQ7Z353 690 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 SRGAP1Q7Z6B7 1085 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 SENP7Q9BQF6 1050 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 TBC1D7Q9P0N9 293 aa14.13□□□□□ -0.15
CLK3-201ENST00000345005 ITIH6Q6UXX5 1313 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 ARHGEF35A5YM69 484 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 WDR64B1ANS9 1081 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 ATP9AO75110 1047 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 LYPLA2O95372 231 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 FKBP1BP68106 108 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 STXBP2Q15833 593 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 ZNF746Q6NUN9 644 aaPredicted RBP14.12□□□□□ -0.15
CLK3-201ENST00000345005 NCAPG2Q86XI2 1143 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 CNGA4Q8IV77 575 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 LRRN4CLQ8ND94 238 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 CNOT6LQ96LI5 555 aaKnown RBP14.12□□□□□ -0.15
CLK3-201ENST00000345005 PAGR1Q9BTK6 254 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 PARD6BQ9BYG5 372 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 CDC23Q9UJX2 597 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 DBR1Q9UK59 544 aaKnown RBP14.12□□□□□ -0.15
CLK3-201ENST00000345005 NFASCO94856 1347 aa14.12□□□□□ -0.15
CLK3-201ENST00000345005 LGALS16A8MUM7 142 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 ZBTB39O15060 712 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 FAM13AO94988 1023 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 IVLP07476 585 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 MCM3P25205 808 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 OAS2P29728 719 aaKnown RBP14.11□□□□□ -0.15
CLK3-201ENST00000345005 HNRNPH2P55795 449 aaKnown RBP14.11□□□□□ -0.15
CLK3-201ENST00000345005 UBXN1Q04323 297 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 GPAT2Q6NUI2 795 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 SFR1Q86XK3 245 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 GLIS3Q8NEA6 775 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 GOLGA5Q8TBA6 731 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 TUBGCP2Q9BSJ2 902 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 MOV10L1Q9BXT6 1211 aaKnown RBP14.11□□□□□ -0.15
CLK3-201ENST00000345005 ZNF408Q9H9D4 720 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 WRAP73Q9P2S5 460 aaPredicted RBP14.11□□□□□ -0.15
CLK3-201ENST00000345005 ODF2LQ9ULJ1 636 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 B4DLN1 442 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 SPATA31C2B4DYI2 1134 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 TRAF5O00463 557 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 MAP2K7O14733 419 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 KIF3CO14782 793 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 CNMDO75829 334 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 POTEJP0CG39 1038 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 MTIF2P46199 727 aaKnown RBP14.11□□□□□ -0.15
CLK3-201ENST00000345005 DNM2P50570 870 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 CHMP4BP1P59074 171 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 PSMC5P62195 406 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 FKBP3Q00688 224 aaKnown RBP14.11□□□□□ -0.15
CLK3-201ENST00000345005 TRIM14Q14142 442 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 PTPN21Q16825 1174 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 ZCWPW2Q504Y3 356 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 PPP4R3CPQ6ZMV5 832 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.11□□□□□ -0.15
CLK3-201ENST00000345005 C4orf19Q8IY42 314 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 SCFD1Q8WVM8 642 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 FUT8Q9BYC5 575 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 OLFML3Q9NRN5 406 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 SEL1LQ9UBV2 794 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 RAB21Q9UL25 225 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 PNMA3Q9UL41 463 aa14.11□□□□□ -0.15
CLK3-201ENST00000345005 A0A1W2PQC6 194 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 DKC1O60832 514 aaKnown RBP eCLIP14.1□□□□□ -0.15
CLK3-201ENST00000345005 RGS20O76081 388 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 KCNA2P16389 499 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 GUCY2CP25092 1073 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 GJA5P36382 358 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 WHAMMP3Q1A5X7 153 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 LONRF2Q1L5Z9 754 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 EPM2AIP1Q7L775 607 aaPredicted RBP14.1□□□□□ -0.15
CLK3-201ENST00000345005 TMTC1Q8IUR5 882 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 MSANTD4Q8NCY6 345 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 GTF3C2Q8WUA4 911 aaPredicted RBP14.1□□□□□ -0.15
CLK3-201ENST00000345005 CEP63Q96MT8 703 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 WDR24Q96S15 920 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 MRPL44Q9H9J2 332 aaKnown RBP14.1□□□□□ -0.15
CLK3-201ENST00000345005 RRAGCQ9HB90 399 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 PARVGQ9HBI0 331 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 RBPJLQ9UBG7 517 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 PCDHA10Q9Y5I2 948 aa14.1□□□□□ -0.15
CLK3-201ENST00000345005 CTAGE9A4FU28 777 aa14.09□□□□□ -0.15
CLK3-201ENST00000345005 RSPH10B2B2RC85 870 aa14.09□□□□□ -0.15
CLK3-201ENST00000345005 POLR3GO15318 223 aaPredicted RBP14.09□□□□□ -0.15
CLK3-201ENST00000345005 PEX10O60683 326 aa14.09□□□□□ -0.15
CLK3-201ENST00000345005 CCNE2O96020 404 aa14.09□□□□□ -0.15
CLK3-201ENST00000345005 RSPH10BP0C881 870 aa14.09□□□□□ -0.15
CLK3-201ENST00000345005 CETPP11597 493 aa14.09□□□□□ -0.15
CLK3-201ENST00000345005 ERCC3P19447 782 aa14.09□□□□□ -0.15
CLK3-201ENST00000345005 ICAM3P32942 547 aa14.09□□□□□ -0.15
CLK3-201ENST00000345005 ALDH5A1P51649 535 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms