RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 UPP2O95045 317 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 MTHFD1LQ6UB35 978 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 NLRC5Q86WI3 1866 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 APBB2Q92870 758 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 RIT2Q99578 217 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 UNC45AQ9H3U1 944 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 THEGQ9P2T0 379 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 GABBR1Q9UBS5 961 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 IGSF9BQ9UPX0 1349 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 INSL6Q9Y581 213 aa16.32■□□□□ 0.2
HMGN3-202ENST00000344726 FAM205CA6NFA0 338 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 SLC37A4O43826 429 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 GAS7O60861 476 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 PSAPP07602 524 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 KLRC1P26715 233 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 CD52P31358 61 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 UGCGQ16739 394 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 LRCH2Q5VUJ6 765 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 MOXD1Q6UVY6 613 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 B3GNT9Q6UX72 402 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 RSPH3Q86UC2 560 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 ETNPPLQ8TBG4 499 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 TGS1Q96RS0 853 aaKnown RBP16.31■□□□□ 0.2
HMGN3-202ENST00000344726 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
HMGN3-202ENST00000344726 DISC1Q9NRI5 854 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 SAMM50Q9Y512 469 aa16.31■□□□□ 0.2
HMGN3-202ENST00000344726 COL1A2P08123 1366 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 SMIM35A0A1B0GVV1 85 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 WDR64B1ANS9 1081 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 ENPP3O14638 875 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 CHMP2AO43633 222 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 ZNF862O60290 1169 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 LINC00271P0C7V0 271 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 XBP1P17861 261 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 TFF2Q03403 129 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 NR5A1Q13285 461 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 LETM2Q2VYF4 491 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 TJAP1Q5JTD0 557 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 TSHZ1Q6ZSZ6 1077 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 PIK3AP1Q6ZUJ8 805 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 TRMT1LQ7Z2T5 733 aaKnown RBP16.3■□□□□ 0.2
HMGN3-202ENST00000344726 RTN4RL1Q86UN2 441 aaPredicted RBP16.3■□□□□ 0.2
HMGN3-202ENST00000344726 TNPO1Q92973 898 aaKnown RBP16.3■□□□□ 0.2
HMGN3-202ENST00000344726 TNFRSF25Q93038 417 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 TEKT3Q9BXF9 490 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 CDHR5Q9HBB8 845 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 TRPV2Q9Y5S1 764 aa16.3■□□□□ 0.2
HMGN3-202ENST00000344726 ATG2AQ2TAZ0 1938 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 CCDC194A0A1B0GVG4 234 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
HMGN3-202ENST00000344726 C22orf31O95567 290 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 FOSBP53539 338 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 ZNF484Q5JVG2 852 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 CKAP2LQ8IYA6 745 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 KIAA0319LQ8IZA0 1049 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 TMEM40Q8WWA1 233 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 ATXN2LQ8WWM7 1075 aaKnown RBP16.29■□□□□ 0.2
HMGN3-202ENST00000344726 BBXQ8WY36 941 aaPredicted RBP16.29■□□□□ 0.2
HMGN3-202ENST00000344726 WASF1Q92558 559 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 ASB2Q96Q27 587 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 YME1L1Q96TA2 773 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 CELF4Q9BZC1 486 aaKnown RBP16.29■□□□□ 0.2
HMGN3-202ENST00000344726 DDX25Q9UHL0 483 aaKnown RBP16.29■□□□□ 0.2
HMGN3-202ENST00000344726 TCEAL9Q9UHQ7 104 aa16.29■□□□□ 0.2
HMGN3-202ENST00000344726 BRWD1Q9NSI6 2320 aa16.28■□□□□ 0.2
HMGN3-202ENST00000344726 IER5Q5VY09 327 aa16.28■□□□□ 0.2
HMGN3-202ENST00000344726 NEK8Q86SG6 692 aa16.28■□□□□ 0.2
HMGN3-202ENST00000344726 CRIPAKQ8N1N5 446 aa16.28■□□□□ 0.2
HMGN3-202ENST00000344726 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
HMGN3-202ENST00000344726 KCNMB3Q9NPA1 279 aa16.28■□□□□ 0.2
HMGN3-202ENST00000344726 PADI3Q9ULW8 664 aa16.28■□□□□ 0.2
HMGN3-202ENST00000344726 LIMCH1Q9UPQ0 1083 aa16.28■□□□□ 0.2
HMGN3-202ENST00000344726 RALGAPA2Q2PPJ7 1873 aa16.28■□□□□ 0.2
HMGN3-202ENST00000344726 KDM3AQ9Y4C1 1321 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 RPLP2P05387 115 aaKnown RBP16.27■□□□□ 0.2
HMGN3-202ENST00000344726 SFNP31947 248 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 KRT2P35908 639 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 RBM25P49756 843 aaKnown RBP16.27■□□□□ 0.2
HMGN3-202ENST00000344726 JAK3P52333 1124 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 PRKCEQ02156 737 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 TMEM266Q2M3C6 531 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 EPC2Q52LR7 807 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 PPP4R3AQ6IN85 833 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 MIER3Q7Z3K6 550 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 CCDC83Q8IWF9 413 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 FBXO22Q8NEZ5 403 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 HAS1Q92839 578 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 PPP1R16BQ96T49 567 aa16.27■□□□□ 0.2
HMGN3-202ENST00000344726 MYO7AQ13402 2215 aa16.27■□□□□ 0.19
HMGN3-202ENST00000344726 KIAA1671Q9BY89 1806 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 BTBD18B2RXH4 712 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 EML1O00423 815 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 WNT7AO00755 349 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 MGEA5O60502 916 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 CCNT1O60563 726 aaKnown RBP16.26■□□□□ 0.19
HMGN3-202ENST00000344726 STBD1O95210 358 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 MMP1P03956 469 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 OATP04181 439 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 KCNQ1P51787 676 aa16.26■□□□□ 0.19
HMGN3-202ENST00000344726 MRPS5P82675 430 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms