RNA–Protein interactions for RNA: ENST00000344404.10

TRIOBP-202, Transcript of TRIO and F-actin binding protein, humanhuman

TSL 2

Gene TRIOBP, Length 7,300 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-202ENST00000344404 VGLL3A8MV65 326 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 H2AFZP0C0S5 128 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 H2AFVQ71UI9 128 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 LARP4BQ92615 738 aaKnown RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 FAF2Q96CS3 445 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 VMP1Q96GC9 406 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 CHAMP1Q96JM3 812 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 BABAM1Q9NWV8 329 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 ATP7AQ04656 1500 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 SRGAP2O75044 1071 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 PDE8BO95263 885 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 AFPP02771 609 aaKnown RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 POU5F1BQ06416 359 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 SLFNL1Q499Z3 407 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 PPARGP37231 505 aaPredicted RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 ADORA2BP29275 332 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 KIAA1755Q5JYT7 1200 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 ADCK2Q7Z695 626 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 DSCC1Q9BVC3 393 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 FAM47DPA6NHR8 397 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 WBP4O75554 376 aaKnown RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 SYCP2LQ5T4T6 812 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 RFWD2Q8NHY2 731 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 ATXN7L3BQ96GX2 97 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 RMDN3Q96TC7 470 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 EGFL8Q99944 293 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 AP1M1Q9BXS5 423 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 CCDC90BQ9GZT6 254 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 ANTXR1Q9H6X2 564 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 C6orf203Q9P0P8 240 aaPredicted RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 RPRD2Q5VT52 1461 aaKnown RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 DFFAO00273 331 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 SEMA3EO15041 775 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 ZBED1O96006 694 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 GSPT1P15170 499 aaKnown RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 TSPY1Q01534 308 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 TAF11Q15544 211 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 TJAP1Q5JTD0 557 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 JPH2Q9BR39 696 aaPredicted RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 TEX12Q9BXU0 123 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 DRC3Q9H069 523 aa13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 KLHL8Q9P2G9 620 aaPredicted RBP13.13□□□□□ -0.31
TRIOBP-202ENST00000344404 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 C6orf222P0C671 652 aaPredicted RBP13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 USP28Q96RU2 1077 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 GTSE1Q9NYZ3 720 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 FARP1Q9Y4F1 1045 aaPredicted RBP13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 PRAG1Q86YV5 1406 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 AP1B1Q10567 949 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 BBS9Q3SYG4 887 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 ZBTB18Q99592 522 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 UBXN8O00124 270 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 IGFBP4P22692 258 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 ESRRGP62508 458 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 GPSM2P81274 684 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 GRAPQ13588 217 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 EZH2Q15910 746 aaKnown RBP13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 PODNQ7Z5L7 613 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 C11orf96Q7Z7L8 435 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 GRAPLQ8TC17 118 aaPredicted RBP13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 CNOT7Q9UIV1 285 aaKnown RBP13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 PCDHA4Q9UN74 947 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 MAST1Q9Y2H9 1570 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 GCC2Q8IWJ2 1684 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 PCCAP05165 728 aaPredicted RBP13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 CYP2D6P10635 497 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 CAPZA2P47755 286 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 CDK8P49336 464 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 IL9RQ01113 521 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 NBPF20Q3BBV1 942 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 AARS2Q5JTZ9 985 aaKnown RBP13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 MFSD4BQ5TF39 518 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 NBPF10Q6P3W6 841 aaKnown RBP13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 IQCA1LA6NCM1 817 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 EFCAB8A8MWE9 144 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 ASPRV1Q53RT3 343 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 APOBEC3FQ8IUX4 373 aaKnown RBP13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 GIPC2Q8TF65 315 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 TRIM55Q9BYV6 548 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 GRIK1P39086 918 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 HUNKP57058 714 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 MICALL2Q8IY33 904 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 TUBGCP2Q9BSJ2 902 aa13.12□□□□□ -0.31
TRIOBP-202ENST00000344404 SKOR1P84550 965 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 HDLBPQ00341 1268 aaKnown RBP13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 CERKQ8TCT0 537 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 ULK4Q96C45 1275 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 MAGEB10Q96LZ2 347 aaPredicted RBP13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 BLMP54132 1417 aaPredicted RBP13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 NFKBIAP25963 317 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 ZBTB17Q13105 803 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 MTMR1Q13613 665 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 AGR3Q8TD06 166 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 IMPACTQ9P2X3 320 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 TUBB2AQ13885 445 aa13.11□□□□□ -0.31
TRIOBP-202ENST00000344404 STXBP2Q15833 593 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms