RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ARID5AQ03989 594 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 ADCY2Q08462 1091 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 CAVIN4Q5BKX8 364 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 TBC1D1Q86TI0 1168 aaPredicted RBP10.51□□□□□ -0.73
HOXA1-201ENST00000343060 KIRREL3Q8IZU9 778 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 GBP7Q8N8V2 638 aaPredicted RBP10.51□□□□□ -0.73
HOXA1-201ENST00000343060 PROCA1Q8NCQ7 364 aaPredicted RBP10.51□□□□□ -0.73
HOXA1-201ENST00000343060 OLIG1Q8TAK6 271 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 SNX29Q8TEQ0 813 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 RNF25Q96BH1 459 aaPredicted RBP10.51□□□□□ -0.73
HOXA1-201ENST00000343060 ERP44Q9BS26 406 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.51□□□□□ -0.73
HOXA1-201ENST00000343060 CORO1CQ9ULV4 474 aaPredicted RBP10.51□□□□□ -0.73
HOXA1-201ENST00000343060 NAV1Q8NEY1 1877 aa10.51□□□□□ -0.73
HOXA1-201ENST00000343060 TNRC6CQ9HCJ0 1690 aaKnown RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 DDX3YO15523 660 aaKnown RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 WFS1O76024 890 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 UBOX5O94941 541 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 H2AFZP0C0S5 128 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 UCHL3P15374 230 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 ALDH5A1P51649 535 aaPredicted RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 JAM2P57087 298 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 DHX34Q14147 1143 aaKnown RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 KRT79Q5XKE5 535 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 DENND2CQ68D51 928 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 H2AFVQ71UI9 128 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 REXO1Q8N1G1 1221 aaKnown RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 THOC1Q96FV9 657 aaKnown RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 SELENOSQ9BQE4 189 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 NUDT12Q9BQG2 462 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 FGFBP2Q9BYJ0 223 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 MTFR1LQ9H019 292 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 INTS9Q9NV88 658 aaKnown RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 L3MBTL1Q9Y468 752 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 RPTORQ8N122 1335 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 KLRF2D3W0D1 207 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 hCG_1984214I3L0E3 225 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 SLC37A4O43826 429 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 PDE6CP51160 858 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 KCNJ2P63252 427 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 KCNH2Q12809 1159 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 BNIP1Q12981 228 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 BLMHQ13867 455 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 CNGA2Q16280 664 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 C6orf118Q5T5N4 469 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 DCAF12L1Q5VU92 463 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 MFSD5Q6N075 450 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 CHADLQ6NUI6 762 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 MIS18BP1Q6P0N0 1132 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 PNMA8AQ86V59 439 aaPredicted RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 ZNF713Q8N859 430 aaPredicted RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 RBM46Q8TBY0 533 aaKnown RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 ELAC2Q9BQ52 826 aaKnown RBP10.5□□□□□ -0.73
HOXA1-201ENST00000343060 TMEM47Q9BQJ4 181 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 CARD9Q9H257 536 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 ARHGEF3Q9NR81 526 aa10.5□□□□□ -0.73
HOXA1-201ENST00000343060 NHSQ6T4R5 1651 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 POTEMA6NI47 508 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 O00370 1275 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 KIAA0391O15091 583 aaKnown RBP10.49□□□□□ -0.73
HOXA1-201ENST00000343060 RGS16O15492 202 aaPredicted RBP10.49□□□□□ -0.73
HOXA1-201ENST00000343060 GBP1P32455 592 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 DR1Q01658 176 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 LMNB2Q03252 620 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 PPATQ06203 517 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 CLUL1Q15846 466 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 FAM133BQ5BKY9 247 aaKnown RBP10.49□□□□□ -0.73
HOXA1-201ENST00000343060 ASRGL1Q7L266 308 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 SCFD1Q8WVM8 642 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 AZI2Q9H6S1 392 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 AMFRQ9UKV5 643 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 NR2E1Q9Y466 385 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 DAAM1Q9Y4D1 1078 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 SNED1Q8TER0 1413 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 STRCP1A6NGW2 1772 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 GOLGA6L10A0A0M3HER8 536 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 USP17L3A6NCW0 530 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 USP17L4A6NCW7 530 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 DDX3XO00571 662 aaKnown RBP eCLIP10.49□□□□□ -0.73
HOXA1-201ENST00000343060 SLC26A4O43511 780 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 FGGP02679 453 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 USP17L8P0C7I0 530 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 ACTN1P12814 892 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 GCKP35557 465 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 INHBEP58166 350 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 ECM1Q16610 540 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 SOGA3Q5TF21 947 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 USP17L1Q7RTZ2 530 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 FRMD5Q7Z6J6 570 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 DAAM2Q86T65 1068 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 TBC1D16Q8TBP0 767 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 SPDL1Q96EA4 605 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 NAP1L3Q99457 506 aaPredicted RBP10.49□□□□□ -0.73
HOXA1-201ENST00000343060 PRMT1Q99873 361 aaKnown RBP10.49□□□□□ -0.73
HOXA1-201ENST00000343060 STMN4Q9H169 189 aaPredicted RBP10.49□□□□□ -0.73
HOXA1-201ENST00000343060 ECT2Q9H8V3 914 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 SIX2Q9NPC8 291 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 BSDC1Q9NW68 430 aaPredicted RBP10.49□□□□□ -0.73
HOXA1-201ENST00000343060 MCM9Q9NXL9 1143 aa10.49□□□□□ -0.73
HOXA1-201ENST00000343060 GRHL1Q9NZI5 618 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms