RNA–Protein interactions for RNA: ENST00000340369.3

XIRP1-201, Transcript of xin actin binding repeat containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene XIRP1, Length 6,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIRP1-201ENST00000340369 ANKRD20A8PQ5CZ79 823 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 ANKRD20A2Q5SQ80 823 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 ANKRD20A1Q5TYW2 823 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 GLYCTKQ8IVS8 523 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 ZNF653Q96CK0 615 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 TOPORSQ9NS56 1045 aaPredicted RBP13.59□□□□□ -0.23
XIRP1-201ENST00000340369 MTMR6Q9Y217 621 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 NR2E3Q9Y5X4 410 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 LMNB2Q03252 620 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 TMTC3Q6ZXV5 915 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 TUBGCP2Q9BSJ2 902 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 C19orf81C9J6K1 198 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 GSTA4O15217 222 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 ZKSCAN8Q15776 578 aaPredicted RBP13.59□□□□□ -0.23
XIRP1-201ENST00000340369 ARMCX2Q7L311 632 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 RNF168Q8IYW5 571 aaPredicted RBP13.59□□□□□ -0.23
XIRP1-201ENST00000340369 SCYL3Q8IZE3 742 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 BANK1Q8NDB2 785 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 MED4Q9NPJ6 270 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 ZNF233A6NK53 670 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 CD58P19256 250 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 PPP1R13BQ96KQ4 1090 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 TRIM4Q9C037 500 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 ZSWIM6Q9HCJ5 1215 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 LUC7L3O95232 432 aaKnown RBP13.59□□□□□ -0.23
XIRP1-201ENST00000340369 GSPT1P15170 499 aaKnown RBP13.59□□□□□ -0.23
XIRP1-201ENST00000340369 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
XIRP1-201ENST00000340369 SLC35F6Q8N357 371 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 CCDC197Q8NCU1 140 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 N4BP2L2Q92802 583 aaPredicted RBP13.59□□□□□ -0.23
XIRP1-201ENST00000340369 HEXIM2Q96MH2 286 aaKnown RBP13.59□□□□□ -0.23
XIRP1-201ENST00000340369 PCDHA6Q9UN73 950 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 PCDHA8Q9Y5H6 950 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 NCAPD2Q15021 1401 aa13.59□□□□□ -0.23
XIRP1-201ENST00000340369 GOLGA8QA0A0J9YX86 632 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 GOLGA8OA6NCC3 632 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 F5H6K3 240 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 GOLGA8NF8WBI6 632 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 HEXIM1O94992 359 aaKnown RBP13.58□□□□□ -0.23
XIRP1-201ENST00000340369 JAK3P52333 1124 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 EPHB1P54762 984 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 ETF1P62495 437 aaKnown RBP13.58□□□□□ -0.23
XIRP1-201ENST00000340369 KLRC3Q07444 240 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 VEPH1Q14D04 833 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 NUDT18Q6ZVK8 323 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 TRPC7Q9HCX4 862 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 EPS15L1Q9UBC2 864 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 ORC6Q9Y5N6 252 aa13.58□□□□□ -0.23
XIRP1-201ENST00000340369 GOLGA8SH3BPF8 625 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 ZMYND10O75800 440 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 RPSAP08865 295 aaKnown RBP13.58□□□□□ -0.24
XIRP1-201ENST00000340369 BPIFB4P59827 614 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 SCRN1Q12765 414 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 PTPN21Q16825 1174 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 SWSAP1Q6NVH7 229 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 NR2F2P24468 414 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 DNAAF3Q8N9W5 541 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 ZKSCAN4Q969J2 545 aaPredicted RBP13.58□□□□□ -0.24
XIRP1-201ENST00000340369 FGD4Q96M96 766 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 EIF3CLB5ME19 914 aaKnown RBP13.58□□□□□ -0.24
XIRP1-201ENST00000340369 SEC31AO94979 1220 aaKnown RBP13.58□□□□□ -0.24
XIRP1-201ENST00000340369 MYBP10242 640 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 DDIT3P35638 169 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 PSMC2P35998 433 aaKnown RBP13.58□□□□□ -0.24
XIRP1-201ENST00000340369 IFT88Q13099 833 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 CYP4F22Q6NT55 531 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 GTF3C2Q8WUA4 911 aaPredicted RBP13.58□□□□□ -0.24
XIRP1-201ENST00000340369 EIF3CQ99613 913 aaKnown RBP13.58□□□□□ -0.24
XIRP1-201ENST00000340369 OLA1Q9NTK5 396 aaKnown RBP13.58□□□□□ -0.24
XIRP1-201ENST00000340369 LRRN2O75325 713 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 C2orf54Q08AI8 447 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 LLGL1Q15334 1064 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 LRRC41Q15345 812 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 SGO2Q562F6 1265 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 PDCD7Q8N8D1 485 aaKnown RBP13.58□□□□□ -0.24
XIRP1-201ENST00000340369 SPZ1Q9BXG8 430 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 CPVLQ9H3G5 476 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 RGL2O15211 777 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 KRT1P04264 644 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 CIITAP33076 1130 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 RBL2Q08999 1139 aa13.58□□□□□ -0.24
XIRP1-201ENST00000340369 TULP4Q9NRJ4 1543 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 ALDH1A1P00352 501 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 PDIA3P30101 505 aaKnown RBP13.57□□□□□ -0.24
XIRP1-201ENST00000340369 NNMTP40261 264 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 MSH2P43246 934 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 SH3BGRP55822 239 aaPredicted RBP13.57□□□□□ -0.24
XIRP1-201ENST00000340369 APBA1Q02410 837 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 DEFB115Q30KQ5 88 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 SPDYE1Q8NFV5 336 aaPredicted RBP13.57□□□□□ -0.24
XIRP1-201ENST00000340369 MORC4Q8TE76 937 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 EXOC4Q96A65 974 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 USP42Q9H9J4 1324 aaKnown RBP13.57□□□□□ -0.24
XIRP1-201ENST00000340369 PDCD2Q16342 344 aaPredicted RBP13.57□□□□□ -0.24
XIRP1-201ENST00000340369 SMYD4Q8IYR2 804 aaPredicted RBP13.57□□□□□ -0.24
XIRP1-201ENST00000340369 LARP4BQ92615 738 aaKnown RBP13.57□□□□□ -0.24
XIRP1-201ENST00000340369 CEP95Q96GE4 821 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 ATP6V0A4Q9HBG4 840 aa13.57□□□□□ -0.24
XIRP1-201ENST00000340369 EPB41L5Q9HCM4 733 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms