RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 CLEC4DQ8WXI8 215 aa11.76□□□□□ -0.53
TRAF3IP2-201ENST00000340026 DYDC2Q96IM9 177 aa11.76□□□□□ -0.53
TRAF3IP2-201ENST00000340026 OSBPL9Q96SU4 736 aa11.76□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ACBD3Q9H3P7 528 aa11.76□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ABCB6Q9NP58 842 aa11.76□□□□□ -0.53
TRAF3IP2-201ENST00000340026 SIX2Q9NPC8 291 aa11.76□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TBC1D7Q9P0N9 293 aa11.76□□□□□ -0.53
TRAF3IP2-201ENST00000340026 HDAC6Q9UBN7 1215 aa11.76□□□□□ -0.53
TRAF3IP2-201ENST00000340026 LTBP3Q9NS15 1303 aa11.76□□□□□ -0.53
TRAF3IP2-201ENST00000340026 MYH11P35749 1972 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CLRN2A0PK11 232 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 WNT10BO00744 389 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 PPP1R12BO60237 982 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 FAM13AO94988 1023 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 EPS15P42566 896 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CACNB1Q02641 598 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CALR3Q96L12 384 aaKnown RBP11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ZNF577Q9BSK1 485 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 UNC45AQ9H3U1 944 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 MED4Q9NPJ6 270 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RGL1Q9NZL6 768 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 PCDHB13Q9Y5F0 798 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 MACROD2A1Z1Q3 448 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 P4HA2O15460 535 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RAD17O75943 681 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 NPEPPSP55786 919 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 GFPT1Q06210 699 aaPredicted RBP11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ENPEPQ07075 957 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CCDC70Q6NSX1 233 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RDM1Q8NG50 284 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TEPSINQ96N21 525 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TLR10Q9BXR5 811 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RSPH10B2B2RC85 870 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 IPO5O00410 1097 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 DHX15O43143 795 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CTNND1O60716 968 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 PRPF6O94906 941 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 GCNT3O95395 438 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RSPH10BP0C881 870 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 DPEP1P16444 411 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 IFI16Q16666 785 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 KCNN1Q92952 543 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TMEM39BQ9GZU3 492 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ZSWIM4Q9H7M6 989 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 MYOZ2Q9NPC6 264 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TBC1D22BQ9NU19 505 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TFR2Q9UP52 801 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 MYH10P35580 1976 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 P4HBP07237 508 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CYP4A11Q02928 519 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 EN1Q05925 392 aaPredicted RBP11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CXCL9Q07325 125 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 KLHL30Q0D2K2 578 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 MAPK7Q13164 816 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CASP8Q14790 479 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TNIP1Q15025 636 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 EIF1ADQ8N9N8 165 aaKnown RBP11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TBC1D5Q92609 795 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 JADE2Q9NQC1 790 aa11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ZNF277Q9NRM2 450 aaPredicted RBP11.74□□□□□ -0.53
TRAF3IP2-201ENST00000340026 PDE2AO00408 941 aaPredicted RBP11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 MOCS3O95396 460 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 FERP16591 822 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CYP2C19P33261 490 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TDRD12Q587J7 1177 aaKnown RBP11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 MEI1Q5TIA1 1274 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CIAPIN1Q6FI81 312 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 HS2ST1Q7LGA3 356 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 SPATA4Q8NEY3 305 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TMEM206Q9H813 350 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 MLXIPQ9HAP2 919 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 NLRC4Q9NPP4 1024 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 SALL4Q9UJQ4 1053 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RLFQ13129 1914 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RHOXF2BP0C7M4 288 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ARP10275 920 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ITGB5P18084 799 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 OAS2P29728 719 aaKnown RBP11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CTTNQ14247 550 aaKnown RBP11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CCDC174Q6PII3 467 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 CCNI2Q6ZMN8 369 aaPredicted RBP11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TPH2Q8IWU9 490 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 EXOC4Q96A65 974 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 SENP7Q9BQF6 1050 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RHOXF2Q9BQY4 288 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 ZMYND15Q9H091 742 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 AGO4Q9HCK5 861 aaKnown RBP11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 A0A087X0T9 212 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 FLOT1O75955 427 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TFRCP02786 760 aaKnown RBP11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 FAM228BP0C875 321 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 OAZ1P54368 228 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RASSF7Q02833 373 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 SF3B2Q13435 895 aaKnown RBP11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 RAPGEF1Q13905 1077 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 TCEAL1Q15170 157 aa11.73□□□□□ -0.53
TRAF3IP2-201ENST00000340026 FAM178BQ8IXR5 827 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms