RNA–Protein interactions for RNA: ENST00000339486.7

RIOK3-201, Transcript of RIO kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RIOK3, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-201ENST00000339486 FGFR4P22455 802 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 SCTRP47872 440 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 KCTD19Q17RG1 926 aaPredicted RBP13.48□□□□□ -0.25
RIOK3-201ENST00000339486 CNBD1Q8NA66 436 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 CCHCR1Q8TD31 782 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 CCDC127Q96BQ5 260 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 SERPINA10Q9UK55 444 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 LUC7L3O95232 432 aaKnown RBP13.48□□□□□ -0.25
RIOK3-201ENST00000339486 HSPA6P17066 643 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 GALCP54803 685 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 NAALADL2Q58DX5 795 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 ZNF449Q6P9G9 518 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 DDX20Q9UHI6 824 aaKnown RBP13.48□□□□□ -0.25
RIOK3-201ENST00000339486 NWD1Q149M9 1564 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 H0Y3Z8 333 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 DIAPH2O60879 1101 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 STAT3P40763 770 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 IL9RQ01113 521 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 KAT2BQ92831 832 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 YIPF3Q9GZM5 350 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 VCXQ9H320 206 aa13.48□□□□□ -0.25
RIOK3-201ENST00000339486 UBE2TQ9NPD8 197 aaPredicted RBP13.48□□□□□ -0.25
RIOK3-201ENST00000339486 LRRD1A4D1F6 860 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 SMIM24O75264 130 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 FSBPO95073 299 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 ERVK-9P63128 1117 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 KNOP1Q1ED39 458 aaKnown RBP13.47□□□□□ -0.25
RIOK3-201ENST00000339486 VGLL2Q8N8G2 317 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 ZNF653Q96CK0 615 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 SMC6Q96SB8 1091 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 ECT2Q9H8V3 914 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
RIOK3-201ENST00000339486 MKRN4PQ13434 485 aaPredicted RBP13.47□□□□□ -0.25
RIOK3-201ENST00000339486 DRAP1Q14919 205 aaPredicted RBP13.47□□□□□ -0.25
RIOK3-201ENST00000339486 ANKRD20A3Q5VUR7 823 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 ARHGEF18Q6ZSZ5 1173 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 GBP7Q8N8V2 638 aaPredicted RBP13.47□□□□□ -0.25
RIOK3-201ENST00000339486 GLG1Q92896 1179 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 NOD2Q9HC29 1040 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 PODXLO00592 558 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 KLRC4O43908 158 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 GAS7O60861 476 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 GRB10Q13322 594 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 SWT1Q5T5J6 900 aaKnown RBP13.47□□□□□ -0.25
RIOK3-201ENST00000339486 LRRC8CQ8TDW0 803 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 PCIF1Q9H4Z3 704 aa13.47□□□□□ -0.25
RIOK3-201ENST00000339486 DBR1Q9UK59 544 aaKnown RBP13.47□□□□□ -0.25
RIOK3-201ENST00000339486 HOXA7P31268 230 aaPredicted RBP13.46□□□□□ -0.25
RIOK3-201ENST00000339486 TMED2Q15363 201 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 TRADDQ15628 312 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 TBC1D10BQ4KMP7 808 aaPredicted RBP13.46□□□□□ -0.25
RIOK3-201ENST00000339486 ZNF746Q6NUN9 644 aaPredicted RBP13.46□□□□□ -0.25
RIOK3-201ENST00000339486 KIF2BQ8N4N8 673 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 CALR3Q96L12 384 aaKnown RBP13.46□□□□□ -0.25
RIOK3-201ENST00000339486 USP40Q9NVE5 1235 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 PNMA6FA0A0J9YX94 578 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 CFAP73A6NFT4 308 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 TCP11X1B4DZS4 312 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 hCG_1984214I3L0E3 225 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 ZNF263O14978 683 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 SCP2P22307 547 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 PLCB4Q15147 1175 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 KIAA1755Q5JYT7 1200 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 MEI1Q5TIA1 1274 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 TRPM8Q7Z2W7 1104 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 SRRM1Q8IYB3 904 aaKnown RBP13.46□□□□□ -0.25
RIOK3-201ENST00000339486 ZNF713Q8N859 430 aaPredicted RBP13.46□□□□□ -0.25
RIOK3-201ENST00000339486 PRPF38AQ8NAV1 312 aaKnown RBP13.46□□□□□ -0.25
RIOK3-201ENST00000339486 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 RFFLQ8WZ73 363 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 SAAL1Q96ER3 474 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 SPZ1Q9BXG8 430 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 PITPNM3Q9BZ71 974 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 ETNK1Q9HBU6 452 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 TYW1Q9NV66 732 aaKnown RBP13.46□□□□□ -0.25
RIOK3-201ENST00000339486 NAGPAQ9UK23 515 aa13.46□□□□□ -0.25
RIOK3-201ENST00000339486 TTLL1O95922 423 aa13.46□□□□□ -0.26
RIOK3-201ENST00000339486 ITGA4P13612 1032 aa13.46□□□□□ -0.26
RIOK3-201ENST00000339486 HSPA9P38646 679 aaKnown RBP13.46□□□□□ -0.26
RIOK3-201ENST00000339486 PDIA5Q14554 519 aa13.46□□□□□ -0.26
RIOK3-201ENST00000339486 GPATCH4Q5T3I0 446 aaKnown RBP13.46□□□□□ -0.26
RIOK3-201ENST00000339486 NSMFQ6X4W1 530 aa13.46□□□□□ -0.26
RIOK3-201ENST00000339486 PHLDB2Q86SQ0 1253 aa13.46□□□□□ -0.26
RIOK3-201ENST00000339486 SH3GL2Q99962 352 aa13.46□□□□□ -0.26
RIOK3-201ENST00000339486 GDF3Q9NR23 364 aa13.46□□□□□ -0.26
RIOK3-201ENST00000339486 CCDC160A6NGH7 325 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 K7ENM7 598 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 CPP00450 1065 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 BRAFP15056 766 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 TRAF1Q13077 416 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 SLC29A2Q14542 456 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 NSMCE1Q8WV22 266 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 MAIP1Q8WWC4 291 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 ZKSCAN4Q969J2 545 aaPredicted RBP13.45□□□□□ -0.26
RIOK3-201ENST00000339486 ANAPC5Q9UJX4 755 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 STK24Q9Y6E0 443 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 SHOX2O60902 331 aaPredicted RBP13.45□□□□□ -0.26
RIOK3-201ENST00000339486 CAND2O75155 1236 aa13.45□□□□□ -0.26
RIOK3-201ENST00000339486 TROVE2P10155 538 aaKnown RBP eCLIP13.45□□□□□ -0.26
RIOK3-201ENST00000339486 SBK1Q52WX2 424 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms