RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ADCY1Q08828 1119 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 ZNF268Q14587 947 aaPredicted RBP13.68□□□□□ -0.22
DFFB-202ENST00000339350 MIIPQ5JXC2 388 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 LONP2Q86WA8 852 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 KCNN1Q92952 543 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 MS4A14Q96JA4 679 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 RPGRIP1Q96KN7 1286 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 IFIH1Q9BYX4 1025 aaKnown RBP13.68□□□□□ -0.22
DFFB-202ENST00000339350 CRNKL1Q9BZJ0 848 aaKnown RBP13.68□□□□□ -0.22
DFFB-202ENST00000339350 LRP5O75197 1615 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 A0A1W2PQC6 194 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 ESYT3A0FGR9 886 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 CCT8L1PA6NM43 557 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 FAM200BP0CF97 657 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 SP100P23497 879 aaPredicted RBP13.68□□□□□ -0.22
DFFB-202ENST00000339350 SPA17Q15506 151 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 PTPROQ16827 1216 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 ARL6IP4Q66PJ3 421 aaKnown RBP13.68□□□□□ -0.22
DFFB-202ENST00000339350 ARHGAP20Q9P2F6 1191 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 SALL4Q9UJQ4 1053 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 STK24Q9Y6E0 443 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 ZNF804BA4D1E1 1349 aa13.68□□□□□ -0.22
DFFB-202ENST00000339350 ZSCAN5CA6NGD5 496 aaPredicted RBP13.67□□□□□ -0.22
DFFB-202ENST00000339350 RHOBTB3O94955 611 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 VIL1P09327 827 aaKnown RBP13.67□□□□□ -0.22
DFFB-202ENST00000339350 ALADP13716 330 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 EIF4A3P38919 411 aaKnown RBP13.67□□□□□ -0.22
DFFB-202ENST00000339350 PABPC4Q13310 644 aaKnown RBP eCLIP13.67□□□□□ -0.22
DFFB-202ENST00000339350 LRRC41Q15345 812 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 PARP10Q53GL7 1025 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 GLE1Q53GS7 698 aaKnown RBP13.67□□□□□ -0.22
DFFB-202ENST00000339350 EMC10Q5UCC4 262 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 LMNTD2Q8IXW0 634 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 GLIS3Q8NEA6 775 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 P3H4Q92791 437 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 MKNK2Q9HBH9 465 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 RABL2AQ9UBK7 228 aaPredicted RBP13.67□□□□□ -0.22
DFFB-202ENST00000339350 AKR1B10O60218 316 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 CALML3P27482 149 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 MEA1Q16626 185 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 EMBQ6PCB8 327 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 CREG2Q8IUH2 290 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 CORO1BQ9BR76 489 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.67□□□□□ -0.22
DFFB-202ENST00000339350 TRIM9Q9C026 710 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 KBTBD4Q9NVX7 518 aa13.67□□□□□ -0.22
DFFB-202ENST00000339350 CCNL1Q9UK58 526 aaPredicted RBP13.67□□□□□ -0.22
DFFB-202ENST00000339350 AHDC1Q5TGY3 1603 aaPredicted RBP13.66□□□□□ -0.22
DFFB-202ENST00000339350 VIMP08670 466 aaKnown RBP13.66□□□□□ -0.22
DFFB-202ENST00000339350 TXKP42681 527 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 CBX3Q13185 183 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 DIXDC1Q155Q3 683 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 RRAGAQ7L523 313 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 IQCKQ8N0W5 287 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 KIAA0895Q8NCT3 520 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 GJA10Q969M2 543 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 KCNMB3Q9NPA1 279 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 NLRC4Q9NPP4 1024 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 A0A1B0GUL6 1792 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 TMEM221A6NGB7 291 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 TOM1O60784 492 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 CCNE1P24864 410 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 VAV2P52735 878 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 USP46P62068 366 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 GFPT1Q06210 699 aaPredicted RBP13.66□□□□□ -0.22
DFFB-202ENST00000339350 FOXB2Q5VYV0 432 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 SEPT14Q6ZU15 432 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 ATP11CQ8NB49 1132 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 PYM1Q9BRP8 204 aaKnown RBP13.66□□□□□ -0.22
DFFB-202ENST00000339350 TANGO6Q9C0B7 1094 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 SEMA6BQ9H3T3 888 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 TUBGCP4Q9UGJ1 667 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 MAD2L2Q9UI95 211 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 USP21Q9UK80 565 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 SLC12A4Q9UP95 1085 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 AGAP1Q9UPQ3 857 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 ZNF652Q9Y2D9 606 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 STK38LQ9Y2H1 464 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 PCDHA13Q9Y5I0 950 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 SRRM3A6NNA2 597 aaPredicted RBP13.66□□□□□ -0.22
DFFB-202ENST00000339350 FAM153BP0C7A2 387 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 KIF11P52732 1056 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 NAPAP54920 295 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 RASSF7Q02833 373 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 ARID5AQ03989 594 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 FAM153CQ494X1 144 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 WHAMMQ8TF30 809 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 TCP11L1Q9NUJ3 509 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 TMEM260Q9NX78 707 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 FAM153AQ9UHL3 310 aa13.66□□□□□ -0.22
DFFB-202ENST00000339350 PACSIN2Q9UNF0 486 aaPredicted RBP13.66□□□□□ -0.22
DFFB-202ENST00000339350 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.65□□□□□ -0.22
DFFB-202ENST00000339350 LRRC53A6NM62 1247 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 ORC4O43929 436 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 FGRP09769 529 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 TSPY3P0CV98 308 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 TSPY8P0CW00 308 aa13.65□□□□□ -0.22
DFFB-202ENST00000339350 LBRQ14739 615 aaKnown RBP13.65□□□□□ -0.22
DFFB-202ENST00000339350 CCDC92Q53HC0 331 aaPredicted RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms