RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 ADAM15Q13444 863 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 RTN1Q16799 776 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 TMEM266Q2M3C6 531 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 RNF20Q5VTR2 975 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 MTHFD1LQ6UB35 978 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 NME8Q8N427 588 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 KLHL23Q8NBE8 558 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 SPPL3Q8TCT6 385 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 LRFN2Q9ULH4 789 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 GINS2Q9Y248 185 aa17.81■□□□□ 0.44
LINC01116-202ENST00000339037 hCG_1984214I3L0E3 225 aa17.8■□□□□ 0.44
LINC01116-202ENST00000339037 STXBP3O00186 592 aa17.8■□□□□ 0.44
LINC01116-202ENST00000339037 MEIS1O00470 390 aa17.8■□□□□ 0.44
LINC01116-202ENST00000339037 BACH1O14867 736 aa17.8■□□□□ 0.44
LINC01116-202ENST00000339037 IBSPP21815 317 aaPredicted RBP17.8■□□□□ 0.44
LINC01116-202ENST00000339037 SREBF1P36956 1147 aa17.8■□□□□ 0.44
LINC01116-202ENST00000339037 NFX1Q12986 1120 aaKnown RBP17.8■□□□□ 0.44
LINC01116-202ENST00000339037 AP3B2Q13367 1082 aa17.8■□□□□ 0.44
LINC01116-202ENST00000339037 ZNF713Q8N859 430 aaPredicted RBP17.8■□□□□ 0.44
LINC01116-202ENST00000339037 GLT8D2Q9H1C3 349 aa17.8■□□□□ 0.44
LINC01116-202ENST00000339037 TMX1Q9H3N1 280 aa17.8■□□□□ 0.44
LINC01116-202ENST00000339037 SMCO2A6NFE2 343 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 DDX39AO00148 427 aaKnown RBP17.79■□□□□ 0.44
LINC01116-202ENST00000339037 ZBTB43O43298 467 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 ATG7O95352 703 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 CCNE2O96020 404 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 KLRC1P26715 233 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 ZNF76P36508 570 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 SARSP49591 514 aaKnown RBP17.79■□□□□ 0.44
LINC01116-202ENST00000339037 GATMP50440 423 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 FUT2Q10981 343 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 FAM160B1Q5W0V3 765 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 FAM43BQ6ZT52 329 aaPredicted RBP17.79■□□□□ 0.44
LINC01116-202ENST00000339037 EFHBQ8N7U6 833 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 ATP8B4Q8TF62 1192 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 POF1BQ8WVV4 589 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 MSLNLQ96KJ4 702 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 NEK1Q96PY6 1258 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 BARHL2Q9NY43 387 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 MUTYHQ9UIF7 546 aa17.79■□□□□ 0.44
LINC01116-202ENST00000339037 V9GY48 417 aaPredicted RBP17.79■□□□□ 0.44
LINC01116-202ENST00000339037 IGKV6D-21A0A0A0MT36 114 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 DENND3A2RUS2 1198 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 HBP1O60381 514 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 RPS6KA5O75582 802 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 EYA4O95677 639 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 NRIP1P48552 1158 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 HERC4Q5GLZ8 1057 aaPredicted RBP17.78■□□□□ 0.44
LINC01116-202ENST00000339037 ABHD15Q6UXT9 468 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 HFE2Q6ZVN8 426 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 NIPA1Q7RTP0 329 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 ADGRD2Q7Z7M1 963 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 RNF135Q8IUD6 432 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 SMRP1Q8NCR6 262 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 TCEANC2Q96MN5 208 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 TMEM260Q9NX78 707 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 BRPF3Q9ULD4 1205 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 PCDHB7Q9Y5E2 793 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 ZNF318Q5VUA4 2279 aa17.78■□□□□ 0.44
LINC01116-202ENST00000339037 GOLGA8AA7E2F4 631 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 GOLGA8BA8MQT2 603 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 PPFIA3O75145 1194 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 SPOUT1Q5T280 376 aaKnown RBP17.77■□□□□ 0.44
LINC01116-202ENST00000339037 PDXDC2PQ6P474 469 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 RBM23Q86U06 439 aaKnown RBP17.77■□□□□ 0.44
LINC01116-202ENST00000339037 CCDC60Q8IWA6 550 aaPredicted RBP17.77■□□□□ 0.44
LINC01116-202ENST00000339037 KIAA0319LQ8IZA0 1049 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 MFRPQ9BY79 579 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 KCNH6Q9H252 994 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 ERVK-5Q9HDB9 667 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 ZNF302Q9NR11 478 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 CLEC1BQ9P126 229 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 NOC2LQ9Y3T9 749 aaKnown RBP17.77■□□□□ 0.44
LINC01116-202ENST00000339037 PCDHB12Q9Y5F1 795 aa17.77■□□□□ 0.44
LINC01116-202ENST00000339037 COL1A2P08123 1366 aa17.77■□□□□ 0.43
LINC01116-202ENST00000339037 USP34Q70CQ2 3546 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 FAM86B1E9PN63 330 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 IPO5O00410 1097 aaKnown RBP17.76■□□□□ 0.43
LINC01116-202ENST00000339037 MGEA5O60502 916 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 FAM86B2P0C5J1 330 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 CLK2P49760 499 aaKnown RBP17.76■□□□□ 0.43
LINC01116-202ENST00000339037 EXOSC10Q01780 885 aaKnown RBP17.76■□□□□ 0.43
LINC01116-202ENST00000339037 ZNF484Q5JVG2 852 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 ODR4Q5SWX8 454 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 MIS18BP1Q6P0N0 1132 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 SLC24A5Q71RS6 500 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 CENPQQ7L2Z9 268 aaPredicted RBP17.76■□□□□ 0.43
LINC01116-202ENST00000339037 DHX32Q7L7V1 743 aaKnown RBP17.76■□□□□ 0.43
LINC01116-202ENST00000339037 ALYREFQ86V81 257 aaKnown RBP17.76■□□□□ 0.43
LINC01116-202ENST00000339037 PLA2G4DQ86XP0 818 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 TMEM40Q8WWA1 233 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 ADAM2Q99965 735 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 CDHR5Q9HBB8 845 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 AAASQ9NRG9 546 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 C1orf112Q9NSG2 853 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 PCDHGC5Q9Y5F6 944 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 KIAA1671Q9BY89 1806 aa17.76■□□□□ 0.43
LINC01116-202ENST00000339037 ZDBF2Q9HCK1 2354 aa17.75■□□□□ 0.43
LINC01116-202ENST00000339037 KLF18A0A0U1RQI7 1052 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms