RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 CCDC148Q8NFR7 591 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 NSUN3Q9H649 340 aaKnown RBP12.1□□□□□ -0.47
CAPN3-202ENST00000337571 AGO3Q9H9G7 860 aaKnown RBP12.1□□□□□ -0.47
CAPN3-202ENST00000337571 PADI3Q9ULW8 664 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 FAM50BQ9Y247 325 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 GINS2Q9Y248 185 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 BDP1A6H8Y1 2624 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 ADGRA3Q8IWK6 1321 aa12.1□□□□□ -0.47
CAPN3-202ENST00000337571 LOXHD1Q8IVV2 1947 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 IGKV6D-21A0A0A0MT36 114 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 DGKIO75912 1065 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 CCNE2O96020 404 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 PSAPP07602 524 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 PTCRAQ6ISU1 281 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-202ENST00000337571 TRMT1LQ7Z2T5 733 aaKnown RBP12.09□□□□□ -0.47
CAPN3-202ENST00000337571 SMAP1Q8IYB5 467 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-202ENST00000337571 TRIM22Q8IYM9 498 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 FBXL16Q8N461 479 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 ATP8B4Q8TF62 1192 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 KCNB2Q92953 911 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 PHKBQ93100 1093 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 UIMC1Q96RL1 719 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 SLC26A6Q9BXS9 759 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 LMAN2LQ9H0V9 348 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 CEP131Q9UPN4 1083 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 IGSF9BQ9UPX0 1349 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 TTC28Q96AY4 2481 aa12.09□□□□□ -0.47
CAPN3-202ENST00000337571 COL1A2P08123 1366 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 COL4A6Q14031 1691 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 DENND3A2RUS2 1198 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 C5orf67F2Z3F1 127 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 RPS6KA5O75582 802 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 IBSPP21815 317 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 SSTR3P32745 418 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 NLRP5P59047 1200 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 PRR16Q569H4 304 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 TCEAL5Q5H9L2 206 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 ZNF746Q6NUN9 644 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 RTN4RL1Q86UN2 441 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 NPAS4Q8IUM7 802 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 METTL13Q8N6R0 699 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 BBXQ8WY36 941 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 CLP1Q92989 425 aaKnown RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 ZNF689Q96CS4 500 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 PABPC5Q96DU9 382 aaKnown RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 PLVAPQ9BX97 442 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 RNF26Q9BY78 433 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 PCDHB7Q9Y5E2 793 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 PCDHA10Q9Y5I2 948 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 MYH9P35579 1960 aaKnown RBP12.08□□□□□ -0.48
CAPN3-202ENST00000337571 KDM3AQ9Y4C1 1321 aa12.08□□□□□ -0.48
CAPN3-202ENST00000337571 IGLV3-22A0A075B6J6 115 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 CPLX1O14810 134 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 GPR182O15218 404 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 DHX15O43143 795 aaKnown RBP12.07□□□□□ -0.48
CAPN3-202ENST00000337571 TMOD1P28289 359 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 PDIA3P30101 505 aaKnown RBP12.07□□□□□ -0.48
CAPN3-202ENST00000337571 USP11P51784 963 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 TTC3P53804 2025 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 CCT2P78371 535 aaKnown RBP12.07□□□□□ -0.48
CAPN3-202ENST00000337571 SSRP1Q08945 709 aaKnown RBP12.07□□□□□ -0.48
CAPN3-202ENST00000337571 PKN1Q16512 942 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 TMEM266Q2M3C6 531 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 NAALADL2Q58DX5 795 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 SPOUT1Q5T280 376 aaKnown RBP12.07□□□□□ -0.48
CAPN3-202ENST00000337571 RUFY3Q7L099 469 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 CCDC60Q8IWA6 550 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-202ENST00000337571 CMTR2Q8IYT2 770 aaKnown RBP12.07□□□□□ -0.48
CAPN3-202ENST00000337571 KIAA0319LQ8IZA0 1049 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-202ENST00000337571 CRYGNQ8WXF5 182 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 PPP2R3CQ969Q6 453 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 NRBP2Q9NSY0 501 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 CLDND1Q9NY35 253 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 MAFBQ9Y5Q3 323 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-202ENST00000337571 CYP46A1Q9Y6A2 500 aa12.07□□□□□ -0.48
CAPN3-202ENST00000337571 EVPLQ92817 2033 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 H3BQ06 376 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-202ENST00000337571 GRM6O15303 877 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 MAGEB2O15479 319 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 PPFIA3O75145 1194 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 IFNAR1P17181 557 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 SARSP49591 514 aaKnown RBP12.06□□□□□ -0.48
CAPN3-202ENST00000337571 CRYBB1P53674 252 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-202ENST00000337571 PAN2Q504Q3 1202 aaKnown RBP12.06□□□□□ -0.48
CAPN3-202ENST00000337571 CPLX2Q6PUV4 134 aaKnown RBP12.06□□□□□ -0.48
CAPN3-202ENST00000337571 FAM178BQ8IXR5 827 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 GJD3Q8N144 294 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 NEK9Q8TD19 979 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 P2RX5Q93086 422 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 FAM167AQ96KS9 214 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 AGXT2Q9BYV1 514 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 C22orf23Q9BZE7 217 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 IGFLR1Q9H665 355 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 EPHX3Q9H6B9 360 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 ALG13Q9NP73 1137 aaKnown RBP12.06□□□□□ -0.48
CAPN3-202ENST00000337571 SH3GLB2Q9NR46 395 aa12.06□□□□□ -0.48
CAPN3-202ENST00000337571 AAASQ9NRG9 546 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms