RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 GFPT2O94808 682 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 NR1D1P20393 614 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 KIAA0825Q8IV33 1275 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 PIGOQ8TEQ8 1089 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 RSPH10B2B2RC85 870 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 E7EVH7 732 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 CHUKO15111 745 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 BBOX1O75936 387 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 RSPH10BP0C881 870 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 MYBP10242 640 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 IL1R1P14778 569 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 CTNNA1P35221 906 aaKnown RBP18■□□□□ 0.47
CDC42EP4-201ENST00000335793 NFIAQ12857 509 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 ZNF571Q7Z3V5 609 aaPredicted RBP18■□□□□ 0.47
CDC42EP4-201ENST00000335793 CATSPER3Q86XQ3 398 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 FBXO41Q8TF61 875 aa18■□□□□ 0.47
CDC42EP4-201ENST00000335793 RNPC3Q96LT9 517 aaKnown RBP18■□□□□ 0.47
CDC42EP4-201ENST00000335793 CALUO43852 315 aaPredicted RBP17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 H2AFZP0C0S5 128 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 CDR1P51861 262 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 ARHGAP4P98171 946 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 SF3A3Q12874 501 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 ZCWPW2Q504Y3 356 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 MEI1Q5TIA1 1274 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 H2AFVQ71UI9 128 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 SPDL1Q96EA4 605 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 REEP2Q9BRK0 252 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 GCNT4Q9P109 453 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 EEF2P13639 858 aaKnown RBP17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 RPL13P26373 211 aaKnown RBP17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 SEC24CP53992 1094 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 IFFO1Q0D2I5 559 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 KNOP1Q1ED39 458 aaKnown RBP17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 SHROOM1Q2M3G4 852 aaPredicted RBP17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 TPH2Q8IWU9 490 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 MYCT1Q8N699 235 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 USP38Q8NB14 1042 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 IRS2Q9Y4H2 1338 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 CASP4P49662 377 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 SLFN12Q8IYM2 578 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 SPICE1Q8N0Z3 855 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 RGL1Q9NZL6 768 aa17.99■□□□□ 0.47
CDC42EP4-201ENST00000335793 GCOM1H8Y6P7 765 aaPredicted RBP17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 FAM13AO94988 1023 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 KIF4AO95239 1232 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 GDF11O95390 407 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 MYZAPP0CAP1 466 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 CERKLQ49MI3 558 aaPredicted RBP17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 SYN2Q92777 582 aaPredicted RBP17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 CAVIN3Q969G5 261 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 TBC1D31Q96DN5 1066 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 NAP1L4Q99733 375 aaKnown RBP17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.98■□□□□ 0.472e-6■■■■■ 118.6
CDC42EP4-201ENST00000335793 AMACRQ9UHK6 382 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 ZNF233A6NK53 670 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 ARHGAP44Q17R89 818 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 BCAS3Q9H6U6 928 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 CCDC88AQ3V6T2 1871 aa17.98■□□□□ 0.47
CDC42EP4-201ENST00000335793 SART1O43290 800 aaKnown RBP17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 UBXN2AP68543 259 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 MAEAQ7L5Y9 396 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 ZNF483Q8TF39 744 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 TEKT1Q969V4 418 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 SPATS2LQ9NUQ6 558 aaKnown RBP17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 SWAP70Q9UH65 585 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 NAGPAQ9UK23 515 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 KCNA1Q09470 495 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 PPP1R18Q6NYC8 613 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 B4GALNT4Q76KP1 1039 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 WHAMMQ8TF30 809 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 LMBR1Q8WVP7 490 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 KLC4Q9NSK0 619 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 A0A1B0GUA9 196 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 PGRMC1O00264 195 aaKnown RBP17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 AKAP3O75969 853 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 SHMT1P34896 483 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 CYP2J2P51589 502 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 CTTNQ14247 550 aaKnown RBP17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 ARSHQ5FYA8 562 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 ZFPM1Q8IX07 1006 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 FAM163AQ96GL9 167 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 IKZF4Q9H2S9 585 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 KCTD10Q9H3F6 313 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 TAF1DQ9H5J8 278 aaPredicted RBP17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 GDF3Q9NR23 364 aa17.97■□□□□ 0.47
CDC42EP4-201ENST00000335793 SMIM23A6NLE4 172 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 NR3C1P04150 777 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 STAT1P42224 750 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 KSR1Q8IVT5 923 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 RUBCNQ92622 972 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 AIPL1Q9NZN9 384 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 BCS1LQ9Y276 419 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 NHSL1Q5SYE7 1610 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 KLHL33A6NCF5 533 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 UPP2O95045 317 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 PON1P27169 355 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 IRX1P78414 480 aaPredicted RBP17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 CDC42EP5Q6NZY7 148 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 HOMEZQ8IX15 550 aa17.96■□□□□ 0.47
CDC42EP4-201ENST00000335793 CYP2W1Q8TAV3 490 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms