RNA–Protein interactions for RNA: ENST00000335643.12

KATNA1-201, Transcript of katanin catalytic subunit A1, humanhuman

TSL 1 (best) BASIC

Gene KATNA1, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNA1-201ENST00000335643 ZNF484Q5JVG2 852 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 KIAA0319LQ8IZA0 1049 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 BANK1Q8NDB2 785 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 C8orf76Q96K31 380 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 SH2D3AQ9BRG2 576 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 SLC28A3Q9HAS3 691 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
KATNA1-201ENST00000335643 CDHR5Q9HBB8 845 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 BRMS1Q9HCU9 246 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 GTF3C3Q9Y5Q9 886 aa16.82■□□□□ 0.28
KATNA1-201ENST00000335643 SPIRE1Q08AE8 756 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 FAM117BQ6P1L5 589 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 RSPH3Q86UC2 560 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 TNPO1Q92973 898 aaKnown RBP16.81■□□□□ 0.28
KATNA1-201ENST00000335643 TMX3Q96JJ7 454 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 PRDM12Q9H4Q4 367 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 WRAP73Q9P2S5 460 aaPredicted RBP16.81■□□□□ 0.28
KATNA1-201ENST00000335643 KIF28PB7ZC32 967 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 ST18O60284 1047 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 GJB5O95377 273 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 PPP2R5CQ13362 524 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 PPP2R2DQ66LE6 453 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 FBXO18Q8NFZ0 1043 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 TMEM40Q8WWA1 233 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 SEPT8Q92599 483 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 FAM20AQ96MK3 541 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 CEP89Q96ST8 783 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 PPP1R16BQ96T49 567 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 BACH2Q9BYV9 841 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 TRPV2Q9Y5S1 764 aa16.81■□□□□ 0.28
KATNA1-201ENST00000335643 CD52P31358 61 aa16.8■□□□□ 0.28
KATNA1-201ENST00000335643 CLCN3P51790 818 aa16.8■□□□□ 0.28
KATNA1-201ENST00000335643 HMGN5P82970 282 aaKnown RBP16.8■□□□□ 0.28
KATNA1-201ENST00000335643 ADGRE1Q14246 886 aa16.8■□□□□ 0.28
KATNA1-201ENST00000335643 MYOCDQ8IZQ8 938 aa16.8■□□□□ 0.28
KATNA1-201ENST00000335643 LRRC71Q8N4P6 559 aa16.8■□□□□ 0.28
KATNA1-201ENST00000335643 LINC01465Q8N7H1 131 aa16.8■□□□□ 0.28
KATNA1-201ENST00000335643 RDM1Q8NG50 284 aa16.8■□□□□ 0.28
KATNA1-201ENST00000335643 LINC01599Q8WXQ3 324 aa16.8■□□□□ 0.28
KATNA1-201ENST00000335643 CELF4Q9BZC1 486 aaKnown RBP16.8■□□□□ 0.28
KATNA1-201ENST00000335643 CERS4Q9HA82 394 aa16.8■□□□□ 0.28
KATNA1-201ENST00000335643 COL4A4P53420 1690 aaPredicted RBP16.79■□□□□ 0.28
KATNA1-201ENST00000335643 COL4A6Q14031 1691 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 EPOPA6NHQ4 379 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 TBX3O15119 743 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 TLL1O43897 1013 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 EFCAB14O75071 495 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 VTNP04004 478 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 TAP1Q03518 808 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 TARBP2Q15633 366 aaKnown RBP16.79■□□□□ 0.28
KATNA1-201ENST00000335643 IER5Q5VY09 327 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 TSHZ1Q6ZSZ6 1077 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 FAM167AQ96KS9 214 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 TMEM60Q9H2L4 133 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 ARID2Q68CP9 1835 aa16.79■□□□□ 0.28
KATNA1-201ENST00000335643 RFXAPO00287 272 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 FOSL2P15408 326 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 ATP2B1P20020 1258 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 DRP2Q13474 957 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 TMEM266Q2M3C6 531 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 METTL13Q8N6R0 699 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 FAM184AQ8NB25 1140 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 APBB2Q92870 758 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 NAP1L4Q99733 375 aaKnown RBP16.78■□□□□ 0.28
KATNA1-201ENST00000335643 SEPT9Q9UHD8 586 aaPredicted RBP16.78■□□□□ 0.28
KATNA1-201ENST00000335643 GINS2Q9Y248 185 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 KDM3AQ9Y4C1 1321 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 MYO9BQ13459 2157 aa16.78■□□□□ 0.28
KATNA1-201ENST00000335643 GPR32O75388 356 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 KIZQ2M2Z5 673 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 MTERF2Q49AM1 385 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 PLA2G4FQ68DD2 849 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 NCAPH2Q6IBW4 605 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 EFCAB12Q6NXP0 572 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 ANO5Q75V66 913 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 RTN4RL1Q86UN2 441 aaPredicted RBP16.77■□□□□ 0.28
KATNA1-201ENST00000335643 NME8Q8N427 588 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 ZNF579Q8NAF0 562 aaKnown RBP16.77■□□□□ 0.28
KATNA1-201ENST00000335643 TOP1MTQ969P6 601 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 ZNF668Q96K58 619 aaPredicted RBP16.77■□□□□ 0.28
KATNA1-201ENST00000335643 MTMR9Q96QG7 549 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 ZBED2Q9BTP6 218 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 NIFKQ9BYG3 293 aaKnown RBP16.77■□□□□ 0.28
KATNA1-201ENST00000335643 TMX1Q9H3N1 280 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 NRBP2Q9NSY0 501 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 RGL1Q9NZL6 768 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 PADI3Q9ULW8 664 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 CEP131Q9UPN4 1083 aa16.77■□□□□ 0.28
KATNA1-201ENST00000335643 NEMFO60524 1076 aa16.77■□□□□ 0.27
KATNA1-201ENST00000335643 UPP2O95045 317 aa16.77■□□□□ 0.27
KATNA1-201ENST00000335643 AMHP03971 560 aa16.77■□□□□ 0.27
KATNA1-201ENST00000335643 HTRA4P83105 476 aaPredicted RBP16.77■□□□□ 0.27
KATNA1-201ENST00000335643 NBR1Q14596 966 aa16.77■□□□□ 0.27
KATNA1-201ENST00000335643 SAFBQ15424 915 aaKnown RBP eCLIP16.77■□□□□ 0.27
KATNA1-201ENST00000335643 CALCRLQ16602 461 aa16.77■□□□□ 0.27
KATNA1-201ENST00000335643 XKR3Q5GH77 459 aa16.77■□□□□ 0.27
KATNA1-201ENST00000335643 RAD9AQ99638 391 aa16.77■□□□□ 0.27
KATNA1-201ENST00000335643 OSMRQ99650 979 aa16.77■□□□□ 0.27
KATNA1-201ENST00000335643 FOXP1Q9H334 677 aaPredicted RBP16.77■□□□□ 0.27
KATNA1-201ENST00000335643 NOC2LQ9Y3T9 749 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms