RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 SLC32A1Q9H598 525 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 SLC38A10Q9HBR0 1119 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 STARD7Q9NQZ5 370 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 SMC4Q9NTJ3 1288 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 TOR4AQ9NXH8 423 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 ZNF214Q9UL59 606 aaPredicted RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 USP15Q9Y4E8 981 aaPredicted RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 PCDHB15Q9Y5E8 787 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 IGKV6D-21A0A0A0MT36 114 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 KANSL1LA0AUZ9 987 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 ANKRD18BA2A2Z9 1011 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 RRN3P2A6NIE6 340 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 B4GALT3O60512 393 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 PPFIA2O75334 1257 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 RAD17O75943 681 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 ATP2B2Q01814 1243 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 ENPP2Q13822 863 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 PREPLQ4J6C6 727 aaPredicted RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 KAZNQ674X7 775 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 PCSK4Q6UW60 755 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 RUFY4Q6ZNE9 571 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 TSHZ1Q6ZSZ6 1077 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 SH3BP5LQ7L8J4 393 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 DAGLBQ8NCG7 672 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 GALNT11Q8NCW6 608 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 CADM4Q8NFZ8 388 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 GPT2Q8TD30 523 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 TMC2Q8TDI7 906 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 GPBAR1Q8TDU6 330 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 BCL7CQ8WUZ0 217 aaPredicted RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 ZFAND2BQ8WV99 257 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 SARGQ9BW04 601 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 RUBCNLQ9H714 662 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 VEZTQ9HBM0 779 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 GNL3LQ9NVN8 582 aaKnown RBP1.94□□□□□ -2.1
LINC00643-201ENST00000334389 ANAPC2Q9UJX6 822 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 USP16Q9Y5T5 823 aa1.94□□□□□ -2.1
LINC00643-201ENST00000334389 DOCK3Q8IZD9 2030 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 MYBPHLA2RUH7 354 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 GFRA2O00451 464 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 SMPD1P17405 629 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 GTF2E1P29083 439 aaPredicted RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 HIBADHP31937 336 aaKnown RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 PDE6CP51160 858 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 RCAN1P53805 252 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ENPEPQ07075 957 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 PLD1Q13393 1074 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 SAFB2Q14151 953 aaKnown RBP eCLIP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 PCOLCEQ15113 449 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 MLF2Q15773 248 aaPredicted RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 PPM1JQ5JR12 505 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 DAB2IPQ5VWQ8 1189 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 TIPARPQ7Z3E1 657 aaKnown RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 RALGPS2Q86X27 583 aaPredicted RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 RETREG2Q8NC44 543 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 BEST2Q8NFU1 509 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ZCCHC14Q8WYQ9 949 aaKnown RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 GLG1Q92896 1179 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 RNF25Q96BH1 459 aaPredicted RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 P2RY13Q9BPV8 354 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 TRIM56Q9BRZ2 755 aaKnown RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 MFRPQ9BY79 579 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 CDH19Q9H159 772 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 CAPN10Q9HC96 672 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 LTB4R2Q9NPC1 389 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 TTC7AQ9ULT0 858 aaPredicted RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ADAMTS8Q9UP79 889 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 PLAGL2Q9UPG8 496 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ENTPD4Q9Y227 616 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 BACE2Q9Y5Z0 518 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 CPAMD8Q8IZJ3 1885 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 NAV2Q8IVL1 2488 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 RAI1Q7Z5J4 1906 aaPredicted RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 JMJD1CQ15652 2540 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 A0A0G2JK05 382 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 BCLAF3A2AJT9 711 aaKnown RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 C2orf72A6NCS6 295 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 hCG_1984214I3L0E3 225 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 PIK3CDO00329 1044 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 GAS2O43903 313 aaKnown RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ATG7O95352 703 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 CTSAP10619 480 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 IL9P15248 144 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 GRIA2P42262 883 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 KCNQ1P51787 676 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 RRP1P56182 461 aaKnown RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 FCHO2Q0JRZ9 810 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 MTAPQ13126 283 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ITGA7Q13683 1181 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ACVR2BQ13705 512 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 SULT6B1Q6IMI4 303 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 IQCHQ86VS3 1027 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ZNF713Q8N859 430 aaPredicted RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ASB12Q8WXK4 309 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 TSC1Q92574 1164 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 SYTL4Q96C24 671 aaPredicted RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 ARSGQ96EG1 525 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 IL17RAQ96F46 866 aa1.93□□□□□ -2.1
LINC00643-201ENST00000334389 LIN37Q96GY3 246 aaPredicted RBP1.93□□□□□ -2.1
LINC00643-201ENST00000334389 FEZ1Q99689 392 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms