RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CNNM3Q8NE01 707 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 ZNF668Q96K58 619 aaPredicted RBP18.42■□□□□ 0.54
SHOX-201ENST00000334060 SETD4Q9NVD3 440 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 CCDC39Q9UFE4 941 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 TRPC6Q9Y210 931 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 KDM3AQ9Y4C1 1321 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 SFI1A8K8P3 1242 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 SLFN14P0C7P3 912 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 INSRRP14616 1297 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 CYP11B2P19099 503 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 MFSD10Q14728 455 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 XKR9Q5GH70 373 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 MARCH8Q5T0T0 291 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 ATP6V0A1Q93050 837 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 FGFBP2Q9BYJ0 223 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 GZF1Q9H116 711 aaPredicted RBP18.42■□□□□ 0.54
SHOX-201ENST00000334060 XPNPEP1Q9NQW7 623 aa18.42■□□□□ 0.54
SHOX-201ENST00000334060 LYPLA2O95372 231 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 PSEN2P49810 448 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 ACLYP53396 1101 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 RINT1Q6NUQ1 792 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 PLPPR4Q7Z2D5 763 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 GPBP1Q86WP2 473 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 LRRC71Q8N4P6 559 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 IQUBQ8NA54 791 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 ATP8B4Q8TF62 1192 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 CEP170P1Q96L14 293 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 SMARCAD1Q9H4L7 1026 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 KBTBD4Q9NVX7 518 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 HAS3O00219 553 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 EYA4O95677 639 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 SMIM10L2AP0DMW4 78 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 SMIM10L2BP0DMW5 78 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 NKX3-2P78367 333 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 MKRN4PQ13434 485 aaPredicted RBP18.41■□□□□ 0.54
SHOX-201ENST00000334060 TARBP2Q15633 366 aaKnown RBP18.41■□□□□ 0.54
SHOX-201ENST00000334060 NBPF20Q3BBV1 942 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 DAW1Q8N136 415 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 GLIS3Q8NEA6 775 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 WNT8BQ93098 351 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 NACC1Q96RE7 527 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 PPP1R16BQ96T49 567 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 CYP26B1Q9NR63 512 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 ERAP1Q9NZ08 941 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 HDAC6Q9UBN7 1215 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 DNM3Q9UQ16 869 aa18.41■□□□□ 0.54
SHOX-201ENST00000334060 SCN10AQ9Y5Y9 1956 aa18.4■□□□□ 0.54
SHOX-201ENST00000334060 CST5P28325 142 aaPredicted RBP18.4■□□□□ 0.54
SHOX-201ENST00000334060 PKN2Q16513 984 aaKnown RBP18.4■□□□□ 0.54
SHOX-201ENST00000334060 XKR3Q5GH77 459 aa18.4■□□□□ 0.54
SHOX-201ENST00000334060 FAM160B1Q5W0V3 765 aa18.4■□□□□ 0.54
SHOX-201ENST00000334060 SYT2Q8N9I0 419 aaPredicted RBP18.4■□□□□ 0.54
SHOX-201ENST00000334060 NEK9Q8TD19 979 aa18.4■□□□□ 0.54
SHOX-201ENST00000334060 CTAGE1Q96RT6 745 aa18.4■□□□□ 0.54
SHOX-201ENST00000334060 NT5C3AQ9H0P0 336 aa18.4■□□□□ 0.54
SHOX-201ENST00000334060 CLSTN2Q9H4D0 955 aa18.4■□□□□ 0.54
SHOX-201ENST00000334060 OGDHLQ9ULD0 1010 aa18.4■□□□□ 0.54
SHOX-201ENST00000334060 TRIP12Q14669 1992 aaPredicted RBP18.4■□□□□ 0.54
SHOX-201ENST00000334060 A0A1W2PQ45 241 aaPredicted RBP18.39■□□□□ 0.53
SHOX-201ENST00000334060 A0A1W2PQY0 241 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 MAPK7Q13164 816 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 KLHL40Q2TBA0 621 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 PADI6Q6TGC4 694 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 C1orf186Q6ZWK4 172 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 LMBR1Q8WVP7 490 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 DDX12PQ92771 950 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 DNAJC19Q96DA6 116 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 REEP2Q9BRK0 252 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 BIN1O00499 593 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 KINO60870 393 aaKnown RBP18.39■□□□□ 0.53
SHOX-201ENST00000334060 SGPL1O95470 568 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 RUFY4Q6ZNE9 571 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 BSNDQ8WZ55 320 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 TMEM143Q96AN5 459 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 TRIM9Q9C026 710 aa18.39■□□□□ 0.53
SHOX-201ENST00000334060 ARHGEF35A5YM69 484 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 KLRC4O43908 158 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 EN2P19622 333 aaPredicted RBP18.38■□□□□ 0.53
SHOX-201ENST00000334060 CLCN3P51790 818 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 GRIK4Q16099 956 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 RNF180Q86T96 592 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 KSR1Q8IVT5 923 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 CEP57L1Q8IYX8 460 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 CRISPLD2Q9H0B8 497 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 SPC25Q9HBM1 224 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 STK17AQ9UEE5 414 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 PCDHA5Q9Y5H7 936 aa18.38■□□□□ 0.53
SHOX-201ENST00000334060 TREHO43280 583 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 C22orf31O95567 290 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 TFRCP02786 760 aaKnown RBP18.37■□□□□ 0.53
SHOX-201ENST00000334060 ATN1P54259 1190 aaPredicted RBP18.37■□□□□ 0.53
SHOX-201ENST00000334060 DPYDQ12882 1025 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 PPFIA1Q13136 1202 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 GIT2Q14161 759 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 POSTNQ15063 836 aa18.37■□□□□ 0.53
SHOX-201ENST00000334060 GDF6Q6KF10 455 aaPredicted RBP18.37■□□□□ 0.53
SHOX-201ENST00000334060 SMYD4Q8IYR2 804 aaPredicted RBP18.37■□□□□ 0.53
SHOX-201ENST00000334060 BBXQ8WY36 941 aaPredicted RBP18.37■□□□□ 0.53
SHOX-201ENST00000334060 MTG1Q9BT17 334 aaPredicted RBP18.37■□□□□ 0.53
SHOX-201ENST00000334060 KIFC3Q9BVG8 833 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms