RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 FBXW10Q5XX13 1052 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 APOBEC3HQ6NTF7 200 aaKnown RBP13.47□□□□□ -0.25
VPS33B-201ENST00000333371 FOXR2Q6PJQ5 311 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 LRRC57Q8N9N7 239 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 ETNPPLQ8TBG4 499 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 BHMT2Q9H2M3 363 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 RNF14Q9UBS8 474 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 TMEM59LQ9UK28 342 aa13.47□□□□□ -0.25
VPS33B-201ENST00000333371 KIF13BQ9NQT8 1826 aa13.46□□□□□ -0.25
VPS33B-201ENST00000333371 A0A087WUV0 522 aaPredicted RBP13.46□□□□□ -0.25
VPS33B-201ENST00000333371 ECE2O60344 883 aa13.46□□□□□ -0.25
VPS33B-201ENST00000333371 CHRNA5P30532 468 aa13.46□□□□□ -0.25
VPS33B-201ENST00000333371 LSP1P33241 339 aa13.46□□□□□ -0.25
VPS33B-201ENST00000333371 UAP1Q16222 522 aaPredicted RBP13.46□□□□□ -0.25
VPS33B-201ENST00000333371 NAA35Q5VZE5 725 aa13.46□□□□□ -0.25
VPS33B-201ENST00000333371 ZC3H3Q8IXZ2 948 aaKnown RBP13.46□□□□□ -0.25
VPS33B-201ENST00000333371 CELF4Q9BZC1 486 aaKnown RBP13.46□□□□□ -0.25
VPS33B-201ENST00000333371 SIX2Q9NPC8 291 aa13.46□□□□□ -0.25
VPS33B-201ENST00000333371 BCS1LQ9Y276 419 aa13.46□□□□□ -0.25
VPS33B-201ENST00000333371 SLX4Q8IY92 1834 aa13.46□□□□□ -0.25
VPS33B-201ENST00000333371 ASTN1O14525 1302 aa13.46□□□□□ -0.26
VPS33B-201ENST00000333371 BACH1O14867 736 aa13.46□□□□□ -0.26
VPS33B-201ENST00000333371 GFPT2O94808 682 aa13.46□□□□□ -0.26
VPS33B-201ENST00000333371 XRCC5P13010 732 aaKnown RBP13.46□□□□□ -0.26
VPS33B-201ENST00000333371 USP11P51784 963 aa13.46□□□□□ -0.26
VPS33B-201ENST00000333371 TNNC1P63316 161 aa13.46□□□□□ -0.26
VPS33B-201ENST00000333371 EDRF1Q3B7T1 1238 aa13.46□□□□□ -0.26
VPS33B-201ENST00000333371 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.26
VPS33B-201ENST00000333371 LENG9Q96B70 501 aa13.46□□□□□ -0.26
VPS33B-201ENST00000333371 AMACRQ9UHK6 382 aa13.46□□□□□ -0.26
VPS33B-201ENST00000333371 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.26
VPS33B-201ENST00000333371 SART1O43290 800 aaKnown RBP13.45□□□□□ -0.26
VPS33B-201ENST00000333371 GCNT3O95395 438 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 COPB2P35606 906 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 HSD17B3P37058 310 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 EPHA7Q15375 998 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 STRIP1Q5VSL9 837 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 SLFN13Q68D06 897 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 ADAT2Q7Z6V5 191 aaKnown RBP13.45□□□□□ -0.26
VPS33B-201ENST00000333371 TPCN2Q8NHX9 752 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 U2AF1L4Q8WU68 220 aaKnown RBP13.45□□□□□ -0.26
VPS33B-201ENST00000333371 CNKSR1Q969H4 720 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 ZDHHC15Q96MV8 337 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 TAF1DQ9H5J8 278 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-201ENST00000333371 OSGEPQ9NPF4 335 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 GCNT4Q9P109 453 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 DNM3Q9UQ16 869 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 NR2E1Q9Y466 385 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 GREB1LQ9C091 1923 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-201ENST00000333371 MYO3BQ8WXR4 1341 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 DDTLA6NHG4 134 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-201ENST00000333371 EML1O00423 815 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.269e-12■■□□□ 11.6
VPS33B-201ENST00000333371 ERLIN2O94905 339 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 GDF11O95390 407 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 NR3C1P04150 777 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 ZBTB48P10074 688 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-201ENST00000333371 COG2Q14746 738 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 ZC2HC1CQ53FD0 456 aaPredicted RBP13.45□□□□□ -0.26
VPS33B-201ENST00000333371 KDM7AQ6ZMT4 941 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 SCFD2Q8WU76 684 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 SLC35C1Q96A29 364 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 ATP6V1G3Q96LB4 118 aa13.45□□□□□ -0.26
VPS33B-201ENST00000333371 DAPK3O43293 454 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 NMT1P30419 496 aaKnown RBP13.44□□□□□ -0.26
VPS33B-201ENST00000333371 IKQ13123 557 aaPredicted RBP13.44□□□□□ -0.26
VPS33B-201ENST00000333371 EPM2AIP1Q7L775 607 aaPredicted RBP13.44□□□□□ -0.26
VPS33B-201ENST00000333371 SIAH1Q8IUQ4 282 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 MREGQ8N565 214 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 SYT2Q8N9I0 419 aaPredicted RBP13.44□□□□□ -0.26
VPS33B-201ENST00000333371 TRIM31Q9BZY9 425 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 BCCIPQ9P287 314 aaKnown RBP eCLIP13.44□□□□□ -0.26
VPS33B-201ENST00000333371 TRAF3IP3Q9Y228 551 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 SIPA1L1O43166 1804 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 HDLBPQ00341 1268 aaKnown RBP13.44□□□□□ -0.26
VPS33B-201ENST00000333371 CTTNQ14247 550 aaKnown RBP13.44□□□□□ -0.26
VPS33B-201ENST00000333371 AOC3Q16853 763 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 PEX26Q7Z412 305 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 FRMD5Q7Z6J6 570 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 ISCUQ9H1K1 167 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 DPH5Q9H2P9 285 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 TNS1Q9HBL0 1735 aaKnown RBP13.44□□□□□ -0.26
VPS33B-201ENST00000333371 SCN9AQ15858 1988 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 PITPNM2Q9BZ72 1349 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 IGSF9BQ9UPX0 1349 aa13.44□□□□□ -0.26
VPS33B-201ENST00000333371 DCDC2CA8MYV0 355 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 KRIT1O00522 736 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 MSH4O15457 936 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 TTI1O43156 1089 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 CHMP2AO43633 222 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 ABCB4P21439 1286 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 HSPA9P38646 679 aaKnown RBP13.43□□□□□ -0.26
VPS33B-201ENST00000333371 ITGB3BPQ13352 177 aaPredicted RBP13.43□□□□□ -0.26
VPS33B-201ENST00000333371 DAAM2Q86T65 1068 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 WHAMMQ8TF30 809 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 CRYGNQ8WXF5 182 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 PPANQ9NQ55 473 aaKnown RBP13.43□□□□□ -0.26
VPS33B-201ENST00000333371 STK32BQ9NY57 414 aa13.43□□□□□ -0.26
VPS33B-201ENST00000333371 CYP3A7-CYP3A51PA0A087WV96 503 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms