RNA–Protein interactions for RNA: ENST00000333001.10

CMTM1-203, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 883 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-203ENST00000333001 PIK3AP1Q6ZUJ8 805 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 ETNPPLQ8TBG4 499 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 TRAPPC12Q8WVT3 735 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 ATXN2LQ8WWM7 1075 aaKnown RBP13.81□□□□□ -0.2
CMTM1-203ENST00000333001 PPM1EQ8WY54 764 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 TSPYL2Q9H2G4 693 aaPredicted RBP13.81□□□□□ -0.2
CMTM1-203ENST00000333001 RNF216Q9NWF9 866 aaPredicted RBP13.81□□□□□ -0.2
CMTM1-203ENST00000333001 IGSF9BQ9UPX0 1349 aa13.81□□□□□ -0.2
CMTM1-203ENST00000333001 GTPBP6O43824 516 aaPredicted RBP13.8□□□□□ -0.2
CMTM1-203ENST00000333001 CCNT1O60563 726 aaKnown RBP13.8□□□□□ -0.2
CMTM1-203ENST00000333001 LARGE1O95461 756 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 MMP1P03956 469 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 OATP04181 439 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 POU3F3P20264 500 aaPredicted RBP13.8□□□□□ -0.2
CMTM1-203ENST00000333001 IGFBP4P22692 258 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 HTRA4P83105 476 aaPredicted RBP13.8□□□□□ -0.2
CMTM1-203ENST00000333001 CDC42EP1Q00587 391 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 SAFBQ15424 915 aaKnown RBP eCLIP13.8□□□□□ -0.2
CMTM1-203ENST00000333001 SLFN12Q8IYM2 578 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 KIAA0319LQ8IZA0 1049 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 TGS1Q96RS0 853 aaKnown RBP13.8□□□□□ -0.2
CMTM1-203ENST00000333001 UNC45AQ9H3U1 944 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 THEGQ9P2T0 379 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 PTPRSQ13332 1948 aa13.8□□□□□ -0.2
CMTM1-203ENST00000333001 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.79□□□□□ -0.2
CMTM1-203ENST00000333001 ZBTB42B2RXF5 422 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 ENPP3O14638 875 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 CHMP2AO43633 222 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 C22orf31O95567 290 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 HMGN5P82970 282 aaKnown RBP13.79□□□□□ -0.2
CMTM1-203ENST00000333001 PAK2Q13177 524 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 PPP2R5CQ13362 524 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 RABEP1Q15276 862 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 XKR3Q5GH77 459 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 B3GNT9Q6UX72 402 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 METTL13Q8N6R0 699 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 OXER1Q8TDS5 423 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 ARNTL2Q8WYA1 636 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 SAMD11Q96NU1 681 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 MAP7D2Q96T17 732 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 YME1L1Q96TA2 773 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 KCNMB3Q9NPA1 279 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 LMCD1Q9NZU5 365 aa13.79□□□□□ -0.2
CMTM1-203ENST00000333001 GPR182O15218 404 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 ST18O60284 1047 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 CRYBB1P53674 252 aaPredicted RBP13.78□□□□□ -0.2
CMTM1-203ENST00000333001 ERVK-21P61565 698 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 PSMC5P62195 406 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 PRKCEQ02156 737 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 TMEM62Q0P6H9 643 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 KRT40Q6A162 431 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 FAM117BQ6P1L5 589 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 TRMT1LQ7Z2T5 733 aaKnown RBP13.78□□□□□ -0.2
CMTM1-203ENST00000333001 TMCO2Q7Z6W1 182 aaPredicted RBP13.78□□□□□ -0.2
CMTM1-203ENST00000333001 EXOC8Q8IYI6 725 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 SP7Q8TDD2 431 aaPredicted RBP13.78□□□□□ -0.2
CMTM1-203ENST00000333001 ZBTB10Q96DT7 871 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 NIFKQ9BYG3 293 aaKnown RBP13.78□□□□□ -0.2
CMTM1-203ENST00000333001 OSBPL7Q9BZF2 842 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 GJB4Q9NTQ9 266 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 PADI3Q9ULW8 664 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 LOXHD1Q8IVV2 1947 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 TTC3P53804 2025 aa13.78□□□□□ -0.2
CMTM1-203ENST00000333001 LINC01553A4QN01 128 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 BTBD18B2RXH4 712 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 SLC37A4O43826 429 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 ZNF862O60290 1169 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 JAK2O60674 1132 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 RPS6KA5O75582 802 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 UPP2O95045 317 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 STAG3L1P0CL83 205 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 CD52P31358 61 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 QARSP47897 775 aaKnown RBP13.77□□□□□ -0.21
CMTM1-203ENST00000333001 DNM2P50570 870 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 MRPS5P82675 430 aaKnown RBP13.77□□□□□ -0.21
CMTM1-203ENST00000333001 TBC1D8BQ0IIM8 1120 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 NR5A1Q13285 461 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 ADGRE1Q14246 886 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 CCDC83Q8IWF9 413 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 DIS3L2Q8IYB7 885 aaKnown RBP13.77□□□□□ -0.21
CMTM1-203ENST00000333001 TNFRSF25Q93038 417 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 GJA10Q969M2 543 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 C8orf76Q96K31 380 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 KIF2CQ99661 725 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 JPH2Q9BR39 696 aaPredicted RBP13.77□□□□□ -0.21
CMTM1-203ENST00000333001 AGO3Q9H9G7 860 aaKnown RBP13.77□□□□□ -0.21
CMTM1-203ENST00000333001 CERS4Q9HA82 394 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 PPME1Q9Y570 386 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 XIRP2A4UGR9 3374 aa13.77□□□□□ -0.21
CMTM1-203ENST00000333001 LCHNA4D1U4 455 aa13.76□□□□□ -0.21
CMTM1-203ENST00000333001 P4HBP07237 508 aaKnown RBP13.76□□□□□ -0.21
CMTM1-203ENST00000333001 EPHA7Q15375 998 aa13.76□□□□□ -0.21
CMTM1-203ENST00000333001 FAM184AQ8NB25 1140 aa13.76□□□□□ -0.21
CMTM1-203ENST00000333001 ASB2Q96Q27 587 aa13.76□□□□□ -0.21
CMTM1-203ENST00000333001 AKT3Q9Y243 479 aa13.76□□□□□ -0.21
CMTM1-203ENST00000333001 GINS2Q9Y248 185 aa13.76□□□□□ -0.21
CMTM1-203ENST00000333001 RWDD3Q9Y3V2 267 aa13.76□□□□□ -0.21
CMTM1-203ENST00000333001 KIF3AQ9Y496 699 aa13.76□□□□□ -0.21
CMTM1-203ENST00000333001 CHD9Q3L8U1 2897 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms