RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SLC44A5Q8NCS7 719 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 TRIM9Q9C026 710 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 TMEM60Q9H2L4 133 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 CD209Q9NNX6 404 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 IFNAR2P48551 515 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 LRRC34Q8IZ02 419 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 C4orf32Q8N8J7 132 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 L3MBTL3Q96JM7 780 aaPredicted RBP19.73■□□□□ 0.75
PKP3-201ENST00000331563 PACSIN1Q9BY11 444 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 TCP11L1Q9NUJ3 509 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 ADAMTS1Q9UHI8 967 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 GGA1Q9UJY5 639 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 CD2APQ9Y5K6 639 aa19.73■□□□□ 0.75
PKP3-201ENST00000331563 FAM163BP0C2L3 166 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 CALM1P0DP23 149 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 CALM2P0DP24 149 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 CALM3P0DP25 149 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 MYBP10242 640 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 GNAT1P11488 350 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 CNNM4Q6P4Q7 775 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 TMC3Q7Z5M5 1100 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 RBM17Q96I25 401 aaKnown RBP19.72■□□□□ 0.75
PKP3-201ENST00000331563 MXD3Q9BW11 206 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 BRIP1Q9BX63 1249 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 LRRC4CQ9HCJ2 640 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 SLC5A4Q9NY91 659 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 SETSIPP0DME0 302 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 MAGEA8P43361 318 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 RANBP1P43487 201 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 TROAPQ12815 778 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 HGSNATQ68CP4 663 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 ANKRD23Q86SG2 305 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 CABP7Q86V35 215 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 MAPKAPK5Q8IW41 473 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 BLIDQ8IZY5 108 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 EIF1ADQ8N9N8 165 aaKnown RBP19.72■□□□□ 0.75
PKP3-201ENST00000331563 CCDC113Q9H0I3 377 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 ABCF3Q9NUQ8 709 aa19.72■□□□□ 0.75
PKP3-201ENST00000331563 G3BP2Q9UN86 482 aaKnown RBP19.72■□□□□ 0.75
PKP3-201ENST00000331563 SERPING1P05155 500 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 NQO1P15559 274 aaKnown RBP19.71■□□□□ 0.75
PKP3-201ENST00000331563 RAPGEF1Q13905 1077 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 HHATQ5VTY9 493 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 ZNF804AQ7Z570 1209 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 ZFATQ9P243 1243 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 AGAP1Q9UPQ3 857 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 CNTNAP5Q8WYK1 1306 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 F8VZ95 297 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 PYGBP11216 843 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 ATP4AP20648 1035 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 PPP1R2P41236 205 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 ALDH5A1P51649 535 aaPredicted RBP19.71■□□□□ 0.75
PKP3-201ENST00000331563 POLR2FP61218 127 aaKnown RBP19.71■□□□□ 0.75
PKP3-201ENST00000331563 ITIH4Q14624 930 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 HOOK3Q86VS8 718 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 SPICE1Q8N0Z3 855 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 TBC1D16Q8TBP0 767 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 LRRC15Q8TF66 581 aa19.71■□□□□ 0.75
PKP3-201ENST00000331563 GPKOWQ92917 476 aaPredicted RBP eCLIP19.71■□□□□ 0.75
PKP3-201ENST00000331563 INTS9Q9NV88 658 aaKnown RBP19.71■□□□□ 0.75
PKP3-201ENST00000331563 PGRMC1O00264 195 aaKnown RBP19.71■□□□□ 0.74
PKP3-201ENST00000331563 SMIM24O75264 130 aa19.71■□□□□ 0.74
PKP3-201ENST00000331563 FGFR1OPO95684 399 aaKnown RBP19.71■□□□□ 0.74
PKP3-201ENST00000331563 CALML3P27482 149 aa19.71■□□□□ 0.74
PKP3-201ENST00000331563 TRIM68Q6AZZ1 485 aa19.71■□□□□ 0.74
PKP3-201ENST00000331563 NCAPG2Q86XI2 1143 aa19.71■□□□□ 0.74
PKP3-201ENST00000331563 KIF2BQ8N4N8 673 aa19.71■□□□□ 0.74
PKP3-201ENST00000331563 ANKS1AQ92625 1134 aa19.71■□□□□ 0.74
PKP3-201ENST00000331563 ECT2Q9H8V3 914 aa19.71■□□□□ 0.74
PKP3-201ENST00000331563 ANAPC4Q9UJX5 808 aa19.71■□□□□ 0.74
PKP3-201ENST00000331563 ASAP2O43150 1006 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 TTI1O43156 1089 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 UPP2O95045 317 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 LUC7L3O95232 432 aaKnown RBP19.7■□□□□ 0.74
PKP3-201ENST00000331563 ZNF268Q14587 947 aaPredicted RBP19.7■□□□□ 0.74
PKP3-201ENST00000331563 KIAA0895Q8NCT3 520 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 KLHL29Q96CT2 875 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 ZNF317Q96PQ6 595 aaPredicted RBP19.7■□□□□ 0.74
PKP3-201ENST00000331563 PRMT1Q99873 361 aaKnown RBP19.7■□□□□ 0.74
PKP3-201ENST00000331563 UTP11Q9Y3A2 253 aaKnown RBP19.7■□□□□ 0.74
PKP3-201ENST00000331563 A0A087X0T9 212 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 GOLGA6L10A0A0M3HER8 536 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 IGF2BP3O00425 579 aaKnown RBP eCLIP19.7■□□□□ 0.74
PKP3-201ENST00000331563 EVI5O60447 810 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 UBOX5O94941 541 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 MMP10P09238 476 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 FAM228BP0C875 321 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 IMPDH2P12268 514 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 CCND1P24385 295 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 INF2Q27J81 1249 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 MTHFD1LQ6UB35 978 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 ERICH1Q86X53 443 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 FAM81AQ8TBF8 368 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 CNKSR1Q969H4 720 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 CELF4Q9BZC1 486 aaKnown RBP19.7■□□□□ 0.74
PKP3-201ENST00000331563 TMEM59LQ9UK28 342 aa19.7■□□□□ 0.74
PKP3-201ENST00000331563 CTCFP49711 727 aaPredicted RBP19.69■□□□□ 0.74
PKP3-201ENST00000331563 AMPD3Q01432 767 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 KLHL30Q0D2K2 578 aa19.69■□□□□ 0.74
PKP3-201ENST00000331563 DOK7Q18PE1 504 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms