RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 TUBE1Q9UJT0 475 aa29.03■■■□□ 2.24
SMDT1-201ENST00000331479 KIAA1024Q9UPX6 916 aa29.03■■■□□ 2.24
SMDT1-201ENST00000331479 COL1A2P08123 1366 aa29.03■■■□□ 2.24
SMDT1-201ENST00000331479 MBLAC1A4D2B0 266 aaPredicted RBP29.02■■■□□ 2.24
SMDT1-201ENST00000331479 ZRSR1Q15695 479 aaKnown RBP29.02■■■□□ 2.24
SMDT1-201ENST00000331479 CABP7Q86V35 215 aa29.02■■■□□ 2.24
SMDT1-201ENST00000331479 DHX38Q92620 1227 aaKnown RBP29.02■■■□□ 2.24
SMDT1-201ENST00000331479 SPATA32Q96LK8 384 aa29.02■■■□□ 2.24
SMDT1-201ENST00000331479 GDPD2Q9HCC8 539 aa29.02■■■□□ 2.24
SMDT1-201ENST00000331479 TMEM39AQ9NV64 488 aa29.02■■■□□ 2.24
SMDT1-201ENST00000331479 TBX21Q9UL17 535 aa29.02■■■□□ 2.24
SMDT1-201ENST00000331479 TRIM43BA6NCK2 446 aa29.01■■■□□ 2.24
SMDT1-201ENST00000331479 KLRC1P26715 233 aa29.01■■■□□ 2.24
SMDT1-201ENST00000331479 AXDND1Q5T1B0 1012 aaPredicted RBP29.01■■■□□ 2.24
SMDT1-201ENST00000331479 MTHFD1LQ6UB35 978 aa29.01■■■□□ 2.24
SMDT1-201ENST00000331479 RUFY4Q6ZNE9 571 aa29.01■■■□□ 2.24
SMDT1-201ENST00000331479 SERINC5Q86VE9 423 aa29.01■■■□□ 2.24
SMDT1-201ENST00000331479 TRIM43Q96BQ3 446 aaPredicted RBP29.01■■■□□ 2.24
SMDT1-201ENST00000331479 PNMA5Q96PV4 448 aa29.01■■■□□ 2.24
SMDT1-201ENST00000331479 PRDM5Q9NQX1 630 aaPredicted RBP29.01■■■□□ 2.24
SMDT1-201ENST00000331479 DDX19AQ9NUU7 478 aaKnown RBP29.01■■■□□ 2.24
SMDT1-201ENST00000331479 PCDHA7Q9UN72 937 aa29.01■■■□□ 2.24
SMDT1-201ENST00000331479 MUTP22033 750 aa29.01■■■□□ 2.23
SMDT1-201ENST00000331479 UBA7P41226 1012 aa29.01■■■□□ 2.23
SMDT1-201ENST00000331479 ME1P48163 572 aa29.01■■■□□ 2.23
SMDT1-201ENST00000331479 GRB10Q13322 594 aa29.01■■■□□ 2.23
SMDT1-201ENST00000331479 SYMPKQ92797 1274 aaKnown RBP29.01■■■□□ 2.23
SMDT1-201ENST00000331479 PLIN2Q99541 437 aa29.01■■■□□ 2.23
SMDT1-201ENST00000331479 CYP26B1Q9NR63 512 aa29.01■■■□□ 2.23
SMDT1-201ENST00000331479 C22orf31O95567 290 aa29■■■□□ 2.23
SMDT1-201ENST00000331479 HYIQ5T013 277 aa29■■■□□ 2.23
SMDT1-201ENST00000331479 OTUD6AQ7L8S5 288 aa29■■■□□ 2.23
SMDT1-201ENST00000331479 CEP170P1Q96L14 293 aa29■■■□□ 2.23
SMDT1-201ENST00000331479 NACC1Q96RE7 527 aa29■■■□□ 2.23
SMDT1-201ENST00000331479 SCAND2PQ9GZW5 306 aaPredicted RBP29■■■□□ 2.23
SMDT1-201ENST00000331479 CUTAO60888 179 aa28.99■■■□□ 2.23
SMDT1-201ENST00000331479 MLLT1Q03111 559 aaPredicted RBP28.99■■■□□ 2.23
SMDT1-201ENST00000331479 PTK7Q13308 1070 aa28.99■■■□□ 2.23
SMDT1-201ENST00000331479 KCNK18Q7Z418 384 aa28.99■■■□□ 2.23
SMDT1-201ENST00000331479 CCSER1Q9C0I3 900 aa28.99■■■□□ 2.23
SMDT1-201ENST00000331479 ANKEF1Q9NU02 776 aa28.99■■■□□ 2.23
SMDT1-201ENST00000331479 XRCC6P12956 609 aaKnown RBP eCLIP28.98■■■□□ 2.23
SMDT1-201ENST00000331479 ITGB8P26012 769 aa28.98■■■□□ 2.23
SMDT1-201ENST00000331479 RARRES1P49788 294 aa28.98■■■□□ 2.23
SMDT1-201ENST00000331479 KARSQ15046 597 aaKnown RBP28.98■■■□□ 2.23
SMDT1-201ENST00000331479 XKR9Q5GH70 373 aa28.98■■■□□ 2.23
SMDT1-201ENST00000331479 PCDHA2Q9Y5H9 948 aa28.98■■■□□ 2.23
SMDT1-201ENST00000331479 UMODL1Q5DID0 1318 aa28.98■■■□□ 2.23
SMDT1-201ENST00000331479 KDM3AQ9Y4C1 1321 aa28.98■■■□□ 2.23
SMDT1-201ENST00000331479 ARID2Q68CP9 1835 aa28.97■■■□□ 2.23
SMDT1-201ENST00000331479 KIAA0355O15063 1070 aa28.97■■■□□ 2.23
SMDT1-201ENST00000331479 SYN1P17600 705 aa28.97■■■□□ 2.23
SMDT1-201ENST00000331479 TRIM71Q2Q1W2 868 aaKnown RBP28.97■■■□□ 2.23
SMDT1-201ENST00000331479 SHC4Q6S5L8 630 aa28.97■■■□□ 2.23
SMDT1-201ENST00000331479 LRRC15Q8TF66 581 aa28.97■■■□□ 2.23
SMDT1-201ENST00000331479 NOC4LQ9BVI4 516 aaKnown RBP28.97■■■□□ 2.23
SMDT1-201ENST00000331479 ZMYND8Q9ULU4 1186 aaPredicted RBP28.97■■■□□ 2.23
SMDT1-201ENST00000331479 E9PMD0 336 aa28.96■■■□□ 2.23
SMDT1-201ENST00000331479 TBC1D8BQ0IIM8 1120 aa28.96■■■□□ 2.23
SMDT1-201ENST00000331479 TMEM119Q4V9L6 283 aa28.96■■■□□ 2.23
SMDT1-201ENST00000331479 PPP1R12CQ9BZL4 782 aa28.96■■■□□ 2.23
SMDT1-201ENST00000331479 HIPK3Q9H422 1215 aa28.96■■■□□ 2.23
SMDT1-201ENST00000331479 DBR1Q9UK59 544 aaKnown RBP28.96■■■□□ 2.23
SMDT1-201ENST00000331479 DNAJB3Q8WWF6 145 aa28.96■■■□□ 2.23
SMDT1-201ENST00000331479 CALML4Q96GE6 196 aa28.96■■■□□ 2.23
SMDT1-201ENST00000331479 CDK5RAP3Q96JB5 506 aa28.96■■■□□ 2.23
SMDT1-201ENST00000331479 FAM49AQ9H0Q0 323 aaPredicted RBP28.96■■■□□ 2.23
SMDT1-201ENST00000331479 BMP2KQ9NSY1 1161 aaPredicted RBP28.96■■■□□ 2.23
SMDT1-201ENST00000331479 EVPLQ92817 2033 aa28.95■■■□□ 2.23
SMDT1-201ENST00000331479 MAGEB2O15479 319 aa28.95■■■□□ 2.22
SMDT1-201ENST00000331479 EFCAB12Q6NXP0 572 aa28.95■■■□□ 2.22
SMDT1-201ENST00000331479 TAF2Q6P1X5 1199 aa28.95■■■□□ 2.22
SMDT1-201ENST00000331479 LRRC71Q8N4P6 559 aa28.95■■■□□ 2.22
SMDT1-201ENST00000331479 METTL13Q8N6R0 699 aa28.95■■■□□ 2.22
SMDT1-201ENST00000331479 NT5C3AQ9H0P0 336 aa28.95■■■□□ 2.22
SMDT1-201ENST00000331479 DNM3Q9UQ16 869 aa28.95■■■□□ 2.22
SMDT1-201ENST00000331479 SMIM35A0A1B0GVV1 85 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 RBAK-RBAKDNI3L0D1 243 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 SLC26A4O43511 780 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 MAFO75444 373 aaPredicted RBP28.94■■■□□ 2.22
SMDT1-201ENST00000331479 PLCG1P19174 1290 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 CYP2C18P33260 490 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 LINC01465Q8N7H1 131 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 BHMT2Q9H2M3 363 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 DHX33Q9H6R0 707 aaKnown RBP28.94■■■□□ 2.22
SMDT1-201ENST00000331479 SUGCTQ9HAC7 445 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 PRKAG2Q9UGJ0 569 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 NR2E3Q9Y5X4 410 aa28.94■■■□□ 2.22
SMDT1-201ENST00000331479 A0A087X0B3 334 aa28.93■■■□□ 2.22
SMDT1-201ENST00000331479 IGKV6-21A0A0C4DH24 114 aa28.93■■■□□ 2.22
SMDT1-201ENST00000331479 CKBP12277 381 aa28.93■■■□□ 2.22
SMDT1-201ENST00000331479 THPOP40225 353 aa28.93■■■□□ 2.22
SMDT1-201ENST00000331479 CLCN3P51790 818 aa28.93■■■□□ 2.22
SMDT1-201ENST00000331479 MKRN4PQ13434 485 aaPredicted RBP28.93■■■□□ 2.22
SMDT1-201ENST00000331479 DRP2Q13474 957 aa28.93■■■□□ 2.22
SMDT1-201ENST00000331479 KIAA0319LQ8IZA0 1049 aa28.93■■■□□ 2.22
SMDT1-201ENST00000331479 RASSF8Q8NHQ8 419 aa28.93■■■□□ 2.22
SMDT1-201ENST00000331479 CAGE1Q8TC20 777 aa28.93■■■□□ 2.22
SMDT1-201ENST00000331479 CCDC43Q96MW1 224 aaKnown RBP28.93■■■□□ 2.22
SMDT1-201ENST00000331479 PANK2Q9BZ23 570 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms