RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 PDE8BO95263 885 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 BPIFB4P59827 614 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 ERLEC1Q96DZ1 483 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 RNF181Q9P0P0 153 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 HIF1AQ16665 826 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 MDH1BQ5I0G3 518 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 KIAA1755Q5JYT7 1200 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 CATSPER3Q86XQ3 398 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 SRPK1Q96SB4 655 aaKnown RBP11.33□□□□□ -0.6
CLN8-201ENST00000331222 FAM213AQ9BRX8 229 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 NHEJ1Q9H9Q4 299 aaPredicted RBP11.33□□□□□ -0.6
CLN8-201ENST00000331222 HSPA4LO95757 839 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 CPB1P15086 417 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 CASP1P29466 404 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 CC2D2BQ6DHV5 1058 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 IL17REQ8NFR9 667 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 PI4KBQ9UBF8 816 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 CHEK2O96017 543 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 MMP10P09238 476 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 MAP2K2P36507 400 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 MMP19Q99542 508 aa11.33□□□□□ -0.6
CLN8-201ENST00000331222 PUS7LQ9H0K6 701 aaKnown RBP11.33□□□□□ -0.6
CLN8-201ENST00000331222 EDC4Q6P2E9 1401 aaKnown RBP11.33□□□□□ -0.6
CLN8-201ENST00000331222 E2F8A0AVK6 867 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 PAMP19021 973 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 MTMR1Q13613 665 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 GRAMD1BQ3KR37 738 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 SMIM5Q71RC9 77 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 RASSF3Q86WH2 238 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 DYRK4Q9NR20 520 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 A0A0G2JND7 137 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 GRIK1P39086 918 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 LMNB2Q03252 620 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 KLHL29Q96CT2 875 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 SNAP23O00161 211 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 RAET1EQ8TD07 263 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 SP110Q9HB58 689 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 SYTL2Q9HCH5 934 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 ZSCAN32Q9NX65 697 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 MLH3Q9UHC1 1453 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 SPAG7O75391 227 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 COBLL1Q53SF7 1204 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 ANKRD40Q6AI12 368 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 CCDC197Q8NCU1 140 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 GPT2Q8TD30 523 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 P2RX5Q93086 422 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 VPS11Q9H270 941 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 NNMTP40261 264 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 CDK8P49336 464 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 POLE2P56282 527 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 ADCK2Q7Z695 626 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 NDUFAF2Q8N183 169 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 ULK4Q96C45 1275 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 L3MBTL1Q9Y468 752 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 CYP2D6P10635 497 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 MKRN4PQ13434 485 aaPredicted RBP11.32□□□□□ -0.6
CLN8-201ENST00000331222 ZNF699Q32M78 642 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 PCDHA13Q9Y5I0 950 aa11.32□□□□□ -0.6
CLN8-201ENST00000331222 CHL1O00533 1208 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 CLDN3O15551 220 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 NMT2O60551 498 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 TSPY1Q01534 308 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 ELMSAN1Q6PJG2 1045 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 RINLQ6ZS11 566 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 BBOF1Q8ND07 529 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 USP44Q9H0E7 712 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 EMILIN3Q9NT22 766 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 ANAPC7Q9UJX3 599 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 PCDHA5Q9Y5H7 936 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 PLEKHA8P1O95397 391 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 EIF4A3P38919 411 aaKnown RBP11.31□□□□□ -0.6
CLN8-201ENST00000331222 DPCR1Q3MIW9 517 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 SLC26A7Q8TE54 656 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 RMDN3Q96TC7 470 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 DNAJC7Q99615 494 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 ADAM33Q9BZ11 813 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 MRPL47Q9HD33 250 aaKnown RBP11.31□□□□□ -0.6
CLN8-201ENST00000331222 SAYSD1Q9NPB0 183 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 ZSWIM5Q9P217 1185 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 C2CD2LO14523 706 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 SLC10A5Q5PT55 438 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 GPATCH4Q5T3I0 446 aaKnown RBP11.31□□□□□ -0.6
CLN8-201ENST00000331222 DACH2Q96NX9 599 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 GOLGA8QA0A0J9YX86 632 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 GOLGA8OA6NCC3 632 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 GOLGA8NF8WBI6 632 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 DHX9Q08211 1270 aaKnown RBP11.31□□□□□ -0.6
CLN8-201ENST00000331222 LRRC74AQ0VAA2 488 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 LBHD1Q9BQE6 289 aaPredicted RBP11.31□□□□□ -0.6
CLN8-201ENST00000331222 KLHL11Q9NVR0 708 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 CDV3Q9UKY7 258 aaKnown RBP11.31□□□□□ -0.6
CLN8-201ENST00000331222 NOVA2Q9UNW9 492 aaKnown RBP11.31□□□□□ -0.6
CLN8-201ENST00000331222 LEMD3Q9Y2U8 911 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 KIAA0232Q92628 1395 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 KIAA0556O60303 1618 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 CTNND1O60716 968 aaKnown RBP11.31□□□□□ -0.6
CLN8-201ENST00000331222 PFKFB2O60825 505 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 PNMA3Q9UL41 463 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 KIF21AQ7Z4S6 1674 aa11.31□□□□□ -0.6
CLN8-201ENST00000331222 SEMA3EO15041 775 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms