RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 YWHABP31946 246 aaKnown RBP18.69■□□□□ 0.58
DDX41-201ENST00000330503 MEA1Q16626 185 aa18.69■□□□□ 0.58
DDX41-201ENST00000330503 KSR1Q8IVT5 923 aa18.69■□□□□ 0.58
DDX41-201ENST00000330503 RDM1Q8NG50 284 aa18.69■□□□□ 0.58
DDX41-201ENST00000330503 SMCR8Q8TEV9 937 aaPredicted RBP18.69■□□□□ 0.58
DDX41-201ENST00000330503 ATRIPQ8WXE1 791 aa18.69■□□□□ 0.58
DDX41-201ENST00000330503 IWS1Q96ST2 819 aa18.69■□□□□ 0.58
DDX41-201ENST00000330503 SPATC1LQ9H0A9 340 aa18.69■□□□□ 0.58
DDX41-201ENST00000330503 FANCGO15287 622 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 STAM2O75886 525 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 CCDC175P0C221 793 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 ODR4Q5SWX8 454 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 FAM178BQ8IXR5 827 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 ANKRD35Q8N283 1001 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 OPTNQ96CV9 577 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 GOLGA6L9A6NEM1 432 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 NR3C1P04150 777 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 HERVK_113P62684 666 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 IRX3P78415 501 aaPredicted RBP18.68■□□□□ 0.58
DDX41-201ENST00000330503 LDLRAD1Q5T700 205 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 MAEAQ7L5Y9 396 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 FRMD5Q7Z6J6 570 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 DNERQ8NFT8 737 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 SH2D3AQ9BRG2 576 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 MMRN2Q9H8L6 949 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 AGTPBP1Q9UPW5 1226 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 PCDHA10Q9Y5I2 948 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 NFASCO94856 1347 aa18.68■□□□□ 0.58
DDX41-201ENST00000330503 BACH1O14867 736 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 CLIC2O15247 247 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 STBD1O95210 358 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 GJA5P36382 358 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 SP2Q02086 613 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 ACRBPQ8NEB7 543 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 IQCDQ96DY2 449 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 FAM207AQ9NSI2 230 aaPredicted RBP18.67■□□□□ 0.58
DDX41-201ENST00000330503 ANKEF1Q9NU02 776 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 FBXO40Q9UH90 709 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.67■□□□□ 0.58
DDX41-201ENST00000330503 ZC3H4Q9UPT8 1303 aaKnown RBP18.67■□□□□ 0.58
DDX41-201ENST00000330503 SOWAHBA6NEL2 793 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 PPP1R37O75864 691 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 AKAP3O75969 853 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 MYH11P35749 1972 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 CASP4P49662 377 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 NPEPPSP55786 919 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 NFIL3Q16649 462 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 UTP14CQ5TAP6 766 aaKnown RBP18.67■□□□□ 0.58
DDX41-201ENST00000330503 GPAT2Q6NUI2 795 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 ARMC9Q7Z3E5 817 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 CDHR1Q96JP9 859 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 PAGR1Q9BTK6 254 aa18.67■□□□□ 0.58
DDX41-201ENST00000330503 EPN1Q9Y6I3 576 aaPredicted RBP18.67■□□□□ 0.58
DDX41-201ENST00000330503 SCN4AP35499 1836 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 PFASO15067 1338 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 UBE4BO95155 1302 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 ZNF862O60290 1169 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 EIF3JO75822 258 aaKnown RBP18.66■□□□□ 0.58
DDX41-201ENST00000330503 STXBP2Q15833 593 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 TSR1Q2NL82 804 aaKnown RBP18.66■□□□□ 0.58
DDX41-201ENST00000330503 ANO5Q75V66 913 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 NCAPG2Q86XI2 1143 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 TXNRD2Q9NNW7 524 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 RBPJLQ9UBG7 517 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 DNAI1Q9UI46 699 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 FAM184BQ9ULE4 1060 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 PCDHB13Q9Y5F0 798 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 DOCK5Q9H7D0 1870 aa18.66■□□□□ 0.58
DDX41-201ENST00000330503 USO1O60763 962 aaKnown RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 NOL4O94818 638 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 RPL13P26373 211 aaKnown RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 ICAM3P32942 547 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 ALDH5A1P51649 535 aaPredicted RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 GNPTABQ3T906 1256 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 PLA2G4FQ68DD2 849 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 SMAP1Q8IYB5 467 aaPredicted RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 TSC1Q92574 1164 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 BORCS6Q96GS4 357 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 GABBR1Q9UBS5 961 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 ARMCX3Q9UH62 379 aaPredicted RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 TCEAL9Q9UHQ7 104 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 REXO2Q9Y3B8 237 aaKnown RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 WDR81Q562E7 1941 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 PHLPP2Q6ZVD8 1323 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 POTEJP0CG39 1038 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 HNRNPH3P31942 346 aaKnown RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 KCNH2Q12809 1159 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 Q3C1V9 767 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 XKR9Q5GH70 373 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 ABHD15Q6UXT9 468 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 TRMT1LQ7Z2T5 733 aaKnown RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 ZNF397Q8NF99 534 aaPredicted RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 BAP1Q92560 729 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 JPH1Q9HDC5 661 aaPredicted RBP18.65■□□□□ 0.58
DDX41-201ENST00000330503 DMAC2Q9NW81 257 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 SLC9A2Q9UBY0 812 aa18.65■□□□□ 0.58
DDX41-201ENST00000330503 IQCA1LA6NCM1 817 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 DYNC1I1O14576 645 aa18.64■□□□□ 0.57
DDX41-201ENST00000330503 SLC16A3O15427 465 aaKnown RBP18.64■□□□□ 0.57
DDX41-201ENST00000330503 NDUFA10O95299 355 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms