RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TCP10Q12799 353 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 KCTD16Q68DU8 428 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 MCTP2Q6DN12 878 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 ALKBH5Q6P6C2 394 aaKnown RBP16.8■□□□□ 0.28
BRCC3-201ENST00000330045 PBKQ96KB5 322 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 AMNQ9BXJ7 453 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 FAM107BQ9H098 131 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 ZNF277Q9NRM2 450 aaPredicted RBP16.8■□□□□ 0.28
BRCC3-201ENST00000330045 COL4A5P29400 1685 aa16.8■□□□□ 0.28
BRCC3-201ENST00000330045 PRKCIP41743 596 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 RBM5P52756 815 aaKnown RBP eCLIP16.79■□□□□ 0.28
BRCC3-201ENST00000330045 CERKLQ49MI3 558 aaPredicted RBP16.79■□□□□ 0.28
BRCC3-201ENST00000330045 TCERG1LQ5VWI1 586 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 CD302Q8IX05 232 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 EFCAB13Q8IY85 973 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 SH2D3CQ8N5H7 860 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 RBM46Q8TBY0 533 aaKnown RBP16.79■□□□□ 0.28
BRCC3-201ENST00000330045 PPM1EQ8WY54 764 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 PIK3R5Q8WYR1 880 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 LENG9Q96B70 501 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 FAM20AQ96MK3 541 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 METTL14Q9HCE5 456 aaKnown RBP16.79■□□□□ 0.28
BRCC3-201ENST00000330045 TYW1Q9NV66 732 aaKnown RBP16.79■□□□□ 0.28
BRCC3-201ENST00000330045 STK24Q9Y6E0 443 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 FLOT1O75955 427 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 RPL13P26373 211 aaKnown RBP16.79■□□□□ 0.28
BRCC3-201ENST00000330045 SNAP25P60880 206 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 EPHA7Q15375 998 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 TRADDQ15628 312 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 RABEP2Q9H5N1 569 aa16.79■□□□□ 0.28
BRCC3-201ENST00000330045 ZNF646O15015 1829 aaPredicted RBP16.79■□□□□ 0.28
BRCC3-201ENST00000330045 SPDYE3A6NKU9 549 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 FAM86B1E9PN63 330 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 NR3C1P04150 777 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 FAM86B2P0C5J1 330 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 STRIP1Q5VSL9 837 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 DNAAF5Q86Y56 855 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 LRRC57Q8N9N7 239 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 ACTRT1Q8TDG2 376 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 GOLPH3Q9H4A6 298 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 FBXL5Q9UKA1 691 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 RSPH10B2B2RC85 870 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 CEP104O60308 925 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 FOSP01100 380 aaPredicted RBP16.78■□□□□ 0.28
BRCC3-201ENST00000330045 RSPH10BP0C881 870 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 SREBF1P36956 1147 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 PDCLQ13371 301 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 BMT2Q1RMZ1 405 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 USH1GQ495M9 461 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 FBXO11Q86XK2 927 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 TTLL6Q8N841 843 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 SCFD2Q8WU76 684 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.78■□□□□ 0.28
BRCC3-201ENST00000330045 BHMT2Q9H2M3 363 aa16.78■□□□□ 0.28
BRCC3-201ENST00000330045 TAF1DQ9H5J8 278 aaPredicted RBP16.78■□□□□ 0.28
BRCC3-201ENST00000330045 ASTN1O14525 1302 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 SLC16A3O15427 465 aaKnown RBP16.77■□□□□ 0.28
BRCC3-201ENST00000330045 GCNT3O95395 438 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 ANXA13P27216 316 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 CASP4P49662 377 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 ATP1A2P50993 1020 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 CYP4A11Q02928 519 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 VPS36Q86VN1 386 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 SIAH1Q8IUQ4 282 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 ISCUQ9H1K1 167 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 SIX2Q9NPC8 291 aa16.77■□□□□ 0.28
BRCC3-201ENST00000330045 DDTLA6NHG4 134 aaPredicted RBP16.77■□□□□ 0.27
BRCC3-201ENST00000330045 CLIC2O15247 247 aa16.77■□□□□ 0.27
BRCC3-201ENST00000330045 MSH4O15457 936 aa16.77■□□□□ 0.27
BRCC3-201ENST00000330045 TBCAO75347 108 aaKnown RBP16.77■□□□□ 0.27
BRCC3-201ENST00000330045 RAD17O75943 681 aa16.77■□□□□ 0.27
BRCC3-201ENST00000330045 KDM7AQ6ZMT4 941 aa16.77■□□□□ 0.27
BRCC3-201ENST00000330045 EIF1ADQ8N9N8 165 aaKnown RBP16.77■□□□□ 0.27
BRCC3-201ENST00000330045 TPCN2Q8NHX9 752 aa16.77■□□□□ 0.27
BRCC3-201ENST00000330045 SLC35C1Q96A29 364 aa16.77■□□□□ 0.27
BRCC3-201ENST00000330045 POLD4Q9HCU8 107 aa16.77■□□□□ 0.27
BRCC3-201ENST00000330045 GCNT4Q9P109 453 aa16.77■□□□□ 0.27
BRCC3-201ENST00000330045 PI4KBQ9UBF8 816 aa16.77■□□□□ 0.27
BRCC3-201ENST00000330045 PPP1R1BQ9UD71 204 aaPredicted RBP16.77■□□□□ 0.27
BRCC3-201ENST00000330045 A0A087WUV0 522 aaPredicted RBP16.76■□□□□ 0.27
BRCC3-201ENST00000330045 F5H6K3 240 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 HSPA9P38646 679 aaKnown RBP16.76■□□□□ 0.27
BRCC3-201ENST00000330045 JAM2P57087 298 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 ICA1Q05084 483 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 KLRC3Q07444 240 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 LMBR1Q8WVP7 490 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 CALR3Q96L12 384 aaKnown RBP16.76■□□□□ 0.27
BRCC3-201ENST00000330045 RUSC1Q9BVN2 902 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 AJAP1Q9UKB5 411 aaPredicted RBP16.76■□□□□ 0.27
BRCC3-201ENST00000330045 NENFQ9UMX5 172 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 ZBTB12Q9Y330 459 aaPredicted RBP16.76■□□□□ 0.27
BRCC3-201ENST00000330045 RABGAP1Q9Y3P9 1069 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 FAM169AQ9Y6X4 670 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 TMCO5BA8MYB1 307 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 H2AFZP0C0S5 128 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 CIITAP33076 1130 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 ERVK-9P63128 1117 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 KCNA1Q09470 495 aa16.76■□□□□ 0.27
BRCC3-201ENST00000330045 IKQ13123 557 aaPredicted RBP16.76■□□□□ 0.27
BRCC3-201ENST00000330045 HLTFQ14527 1009 aaKnown RBP eCLIP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms