RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 CASP14P31944 242 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 FXR1P51114 621 aaKnown RBP eCLIP22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 TBC1D8BQ0IIM8 1120 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 MKRN3Q13064 507 aaKnown RBP22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 ELF2Q15723 593 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 TRMT1LQ7Z2T5 733 aaKnown RBP22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 MS4A4AQ96JQ5 239 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 FIZ1Q96SL8 496 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 BAG1Q99933 345 aaPredicted RBP22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 SH2D3AQ9BRG2 576 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 GBA2Q9HCG7 927 aaPredicted RBP22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 V9GYY5 206 aaPredicted RBP22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 PHLPP2Q6ZVD8 1323 aa22.37■■□□□ 1.17
RIPPLY3-201ENST00000329553 SORBS3O60504 671 aa22.36■■□□□ 1.17
RIPPLY3-201ENST00000329553 HIP1RO75146 1068 aa22.36■■□□□ 1.17
RIPPLY3-201ENST00000329553 CYP2C8P10632 490 aa22.36■■□□□ 1.17
RIPPLY3-201ENST00000329553 MAPK7Q13164 816 aa22.36■■□□□ 1.17
RIPPLY3-201ENST00000329553 BMT2Q1RMZ1 405 aa22.36■■□□□ 1.17
RIPPLY3-201ENST00000329553 TRIM65Q6PJ69 517 aa22.36■■□□□ 1.17
RIPPLY3-201ENST00000329553 REXO1L1PQ8IX06 675 aa22.36■■□□□ 1.17
RIPPLY3-201ENST00000329553 DAW1Q8N136 415 aa22.36■■□□□ 1.17
RIPPLY3-201ENST00000329553 JPH1Q9HDC5 661 aaPredicted RBP22.36■■□□□ 1.17
RIPPLY3-201ENST00000329553 RNF225M0QZC1 329 aaPredicted RBP22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 EDNRBP24530 442 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 ICAM3P32942 547 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 KCNA1Q09470 495 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 SEPT14Q6ZU15 432 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 CEP63Q96MT8 703 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 SLC9A2Q9UBY0 812 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 TRAF3IP3Q9Y228 551 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 SP4Q02446 784 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 EDRF1Q3B7T1 1238 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 PPP4R3CPQ6ZMV5 832 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 MAEAQ7L5Y9 396 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 ZC3H3Q8IXZ2 948 aaKnown RBP22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 PANX2Q96RD6 677 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 GABBR1Q9UBS5 961 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 SEL1LQ9UBV2 794 aa22.35■■□□□ 1.17
RIPPLY3-201ENST00000329553 ARHGAP6O43182 974 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 MFAP3LO75121 409 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 PGK2P07205 417 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 FKBP1BP68106 108 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 ADAM9Q13443 819 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 VWA3BQ502W6 1294 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 WDR81Q562E7 1941 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 STX10O60499 249 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 CELF2O95319 508 aaKnown RBP22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 COPB2P35606 906 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 ACTR2P61160 394 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 MAN2A1Q16706 1144 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 ZC2HC1CQ53FD0 456 aaPredicted RBP22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 ODR4Q5SWX8 454 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 FBXO38Q6PIJ6 1188 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 ZNF720Q7Z2F6 126 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 NDST4Q9H3R1 872 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 MYH11P35749 1972 aa22.34■■□□□ 1.17
RIPPLY3-201ENST00000329553 PDXKO00764 312 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 BACH1O14867 736 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 ZNF862O60290 1169 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 CETPP11597 493 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 NPEPPSP55786 919 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 ERVK-9P63128 1117 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 ERVK-24P63145 666 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 PLA2G4FQ68DD2 849 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 SWSAP1Q6NVH7 229 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 FAM178BQ8IXR5 827 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 ANKEF1Q9NU02 776 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 PNMA3Q9UL41 463 aa22.33■■□□□ 1.17
RIPPLY3-201ENST00000329553 BTBD19C9JJ37 291 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 EIF3DO15371 548 aaKnown RBP eCLIP22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 USO1O60763 962 aaKnown RBP22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 PSAPP07602 524 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 TPM1P09493 284 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 TRIM14Q14142 442 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 ABHD15Q6UXT9 468 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 ANO5Q75V66 913 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 CYFIP1Q7L576 1253 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 CNGA4Q8IV77 575 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 C2orf69Q8N8R5 385 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 FGD4Q96M96 766 aa22.33■■□□□ 1.16
RIPPLY3-201ENST00000329553 PDHXO00330 501 aa22.32■■□□□ 1.16
RIPPLY3-201ENST00000329553 ZSCAN12O43309 604 aa22.32■■□□□ 1.16
RIPPLY3-201ENST00000329553 KLK7P49862 253 aa22.32■■□□□ 1.16
RIPPLY3-201ENST00000329553 GTF2A2P52657 109 aa22.32■■□□□ 1.16
RIPPLY3-201ENST00000329553 XKR9Q5GH70 373 aa22.32■■□□□ 1.16
RIPPLY3-201ENST00000329553 KSR1Q8IVT5 923 aa22.32■■□□□ 1.16
RIPPLY3-201ENST00000329553 CCDC43Q96MW1 224 aaKnown RBP22.32■■□□□ 1.16
RIPPLY3-201ENST00000329553 MMP19Q99542 508 aa22.32■■□□□ 1.16
RIPPLY3-201ENST00000329553 TYW1Q9NV66 732 aaKnown RBP22.32■■□□□ 1.16
RIPPLY3-201ENST00000329553 DNAJC25-GNG10A0A024R161 153 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 CCL15-CCL14A0A0B4J2E2 113 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 RASSF10A6NK89 507 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 CETN3O15182 167 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 STBD1O95210 358 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 NR2F2P24468 414 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 KCTD2Q14681 263 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 CCL15Q16663 113 aa22.31■■□□□ 1.16
RIPPLY3-201ENST00000329553 CCDC40Q4G0X9 1142 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms