RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 TELO2Q9Y4R8 837 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 PTCH2Q9Y6C5 1203 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 ATP23Q9Y6H3 246 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 RAPGEF2Q9Y4G8 1499 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 NUP188Q5SRE5 1749 aa2.42□□□□□ -2.02
CCDC144A-201ENST00000328495 CCDC66A2RUB6 948 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 ZNF839A8K0R7 811 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 PDE6AP16499 860 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 PTPN1P18031 435 aaKnown RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 KRT15P19012 456 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 BUD31P41223 144 aaPredicted RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 DNM2P50570 870 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 BMS1Q14692 1282 aaKnown RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 SKOR2Q2VWA4 1001 aaPredicted RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 KLHL36Q8N4N3 616 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 GSTCDQ8NEC7 633 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 SH3RF2Q8TEC5 729 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 UBXN4Q92575 508 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 WASF3Q9UPY6 502 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 CDK11AQ9UQ88 783 aaPredicted RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 DUSP10Q9Y6W6 482 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 KIF7Q2M1P5 1343 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 MAN2B1O00754 1011 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 PLATP00750 562 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 CKMP06732 381 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 PFKPQ01813 784 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 SPATS1Q496A3 300 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 PRRT2Q7Z6L0 340 aaPredicted RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 PTRH1Q86Y79 214 aaKnown RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 IGDCC4Q8TDY8 1250 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 DRC1Q96MC2 740 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 KCNH6Q9H252 994 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 ARHGAP28Q9P2N2 729 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 CBLCQ9ULV8 474 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 INVSQ9Y283 1065 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 PHLPP1O60346 1717 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 ABCC3O15438 1527 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 KDM5DQ9BY66 1539 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 ZNF536O15090 1300 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 TCRBV5S4A2TA0A5A2 114 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 ACOT7O00154 380 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 GLRBP48167 497 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 DBPQ10586 325 aaPredicted RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 ZNF827Q17R98 1081 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 BRAPQ7Z569 592 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 OSTM1Q86WC4 334 aa2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 CISD2Q8N5K1 135 aaKnown RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 CELF4Q9BZC1 486 aaKnown RBP2.41□□□□□ -2.02
CCDC144A-201ENST00000328495 REREQ9P2R6 1566 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 ABCC5O15440 1437 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 PRAMEF25A6NGN4 478 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 ZNF561-AS1K7EIQ3 104 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 LAMTOR5O43504 91 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 CLASP2O75122 1294 aaKnown RBP2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 RASGRP1O95267 797 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 NPTXRO95502 500 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 AMY2AP04746 511 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 AMY2BP19961 511 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 JAM2P57087 298 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 LACTBP83111 547 aaPredicted RBP2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 NFATC3Q12968 1075 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 DPP8Q6V1X1 898 aaPredicted RBP2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 SLC7A14Q8TBB6 771 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 BORCS6Q96GS4 357 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 ZSWIM4Q9H7M6 989 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 KCND1Q9NSA2 647 aa2.4□□□□□ -2.02
CCDC144A-201ENST00000328495 ABCA8O94911 1581 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 JCADQ9P266 1359 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 FAM90A27PA6NNH2 459 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 H0Y858 1186 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 PLD2O14939 933 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 KCNQ2O43526 872 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 KNG1P01042 644 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 ITGB3P05106 788 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 EFEMP1Q12805 493 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 TBC1D10BQ4KMP7 808 aaPredicted RBP2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 PHF19Q5T6S3 580 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 PKN3Q6P5Z2 889 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 GLB1LQ6UWU2 654 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 HHIPL2Q6UWX4 724 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 RALYLQ86SE5 291 aaKnown RBP2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 REXO1L1PQ8IX06 675 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 LILRB2Q8N423 598 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 STPG3Q8N7X2 389 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 MBD6Q96DN6 1003 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 NCOA5Q9HCD5 579 aaKnown RBP2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 SMURF1Q9HCE7 757 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 SLC39A2Q9NP94 309 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 TRPM3Q9HCF6 1732 aaPredicted RBP2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 UHRF1BP1LA0JNW5 1464 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 TET3O43151 1660 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 FAM83GA6ND36 823 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 B4E1Z4 1266 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 B4GALT3O60512 393 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 COL6A1P12109 1028 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 HERVK_113P62684 666 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 ARHGEF18Q6ZSZ5 1173 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 KBTBD2Q8IY47 623 aa2.4□□□□□ -2.03
CCDC144A-201ENST00000328495 IFNL2Q8IZJ0 200 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms