RNA–Protein interactions for RNA: ENST00000328392.10

SKP1-201, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-201ENST00000328392 TOMM22Q9NS69 142 aa5.4□□□□□ -1.54
SKP1-201ENST00000328392 DDX56Q9NY93 547 aaKnown RBP5.4□□□□□ -1.54
SKP1-201ENST00000328392 LCHNA4D1U4 455 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 PRAMEF25A6NGN4 478 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 MROH6A6NGR9 719 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 FAM90A27PA6NNH2 459 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 HIP1RO75146 1068 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 CELA3BP08861 270 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 COL6A1P12109 1028 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 GLRBP48167 497 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 PFKPQ01813 784 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 ITKQ08881 620 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 ZNF174Q15697 407 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 FAM26FQ5R3K3 315 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 BTBD8Q5XKL5 378 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 CD276Q5ZPR3 534 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 IQSEC1Q6DN90 963 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 VASNQ6EMK4 673 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 C11orf74Q86VG3 221 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 KIAA1958Q8N8K9 716 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 DTX3Q8N9I9 347 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 STAG1Q8WVM7 1258 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 YTHDC1Q96MU7 727 aaKnown RBP5.39□□□□□ -1.55
SKP1-201ENST00000328392 EMC7Q9NPA0 242 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 SLC5A4Q9NY91 659 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 INVSQ9Y283 1065 aa5.39□□□□□ -1.55
SKP1-201ENST00000328392 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.38□□□□□ -1.55
SKP1-201ENST00000328392 DVL2O14641 736 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 GPR39O43194 453 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 BRINP1O60477 761 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 CYP1A1P04798 512 aaPredicted RBP5.38□□□□□ -1.55
SKP1-201ENST00000328392 ZBTB48P10074 688 aaPredicted RBP5.38□□□□□ -1.55
SKP1-201ENST00000328392 BPIP17213 487 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 PTPN1P18031 435 aaKnown RBP5.38□□□□□ -1.55
SKP1-201ENST00000328392 PTX3P26022 381 aaPredicted RBP5.38□□□□□ -1.55
SKP1-201ENST00000328392 PLP2Q04941 152 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 SKIDA1Q1XH10 827 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 BRDTQ58F21 947 aaPredicted RBP5.38□□□□□ -1.55
SKP1-201ENST00000328392 TRMT10BQ6PF06 316 aaKnown RBP5.38□□□□□ -1.55
SKP1-201ENST00000328392 KIF18BQ86Y91 864 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 NOSTRINQ8IVI9 506 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 MBD6Q96DN6 1003 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 ELF4Q99607 663 aaPredicted RBP5.38□□□□□ -1.55
SKP1-201ENST00000328392 L2HGDHQ9H9P8 463 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 VTA1Q9NP79 307 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 DLL4Q9NR61 685 aa5.38□□□□□ -1.55
SKP1-201ENST00000328392 G3BP2Q9UN86 482 aaKnown RBP5.38□□□□□ -1.55
SKP1-201ENST00000328392 ZNF839A8K0R7 811 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 B4GALT3O60512 393 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 KRTAP10-2P60368 255 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 KIAA2012Q0VF49 1180 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 DDB1Q16531 1140 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 ARHGAP44Q17R89 818 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 FIGNQ5HY92 759 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 CREB3L3Q68CJ9 461 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 HHIPL2Q6UWX4 724 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 SPATS2Q86XZ4 545 aaKnown RBP5.37□□□□□ -1.55
SKP1-201ENST00000328392 NLGN4XQ8N0W4 816 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 STPG3Q8N7X2 389 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 NUDT10Q8NFP7 164 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 NUDT11Q96G61 164 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 LCORQ96JN0 433 aaPredicted RBP5.37□□□□□ -1.55
SKP1-201ENST00000328392 TMEM168Q9H0V1 697 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 SLC39A2Q9NP94 309 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 KLHL42Q9P2K6 505 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 ZFP69BQ9UJL9 534 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 NUB1Q9Y5A7 615 aa5.37□□□□□ -1.55
SKP1-201ENST00000328392 ZEB2O60315 1214 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 IL18BPO95998 194 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 MMEP08473 750 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 ENO2P09104 434 aaPredicted RBP5.36□□□□□ -1.55
SKP1-201ENST00000328392 PDGFRBP09619 1106 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 LSSP48449 732 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 OCRLQ01968 901 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 MTMR1Q13613 665 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 TBC1D10BQ4KMP7 808 aaPredicted RBP5.36□□□□□ -1.55
SKP1-201ENST00000328392 BROXQ5VW32 411 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 RNF219Q5W0B1 726 aaPredicted RBP5.36□□□□□ -1.55
SKP1-201ENST00000328392 OTOP1Q7RTM1 612 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 PRRT2Q7Z6L0 340 aaPredicted RBP5.36□□□□□ -1.55
SKP1-201ENST00000328392 CNTD1Q8N815 330 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 CEP89Q96ST8 783 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 ORAI3Q9BRQ5 295 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 TRIM8Q9BZR9 551 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 ARHGAP20Q9P2F6 1191 aa5.36□□□□□ -1.55
SKP1-201ENST00000328392 APOBEC2Q9Y235 224 aaKnown RBP5.36□□□□□ -1.55
SKP1-201ENST00000328392 WASHC2CQ9Y4E1 1318 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 C9orf118A6NHY6 69 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 TGM5O43548 720 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 PRKD3O94806 890 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 KLHL18O94889 574 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 KNG1P01042 644 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 S100BP04271 92 aaPredicted RBP5.35□□□□□ -1.55
SKP1-201ENST00000328392 DBPQ10586 325 aaPredicted RBP5.35□□□□□ -1.55
SKP1-201ENST00000328392 PLEKHG6Q3KR16 790 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 CMIPQ8IY22 773 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 LGI4Q8N135 537 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 RTF1Q92541 710 aaKnown RBP5.35□□□□□ -1.55
SKP1-201ENST00000328392 SLC5A5Q92911 643 aa5.35□□□□□ -1.55
SKP1-201ENST00000328392 WRNIP1Q96S55 665 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms