RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 RPL13P26373 211 aaKnown RBP16.46■□□□□ 0.22
TPM3-205ENST00000328159 ETF1P62495 437 aaKnown RBP16.46■□□□□ 0.22
TPM3-205ENST00000328159 ZC2HC1CQ53FD0 456 aaPredicted RBP16.46■□□□□ 0.22
TPM3-205ENST00000328159 ODR4Q5SWX8 454 aa16.46■□□□□ 0.22
TPM3-205ENST00000328159 SYT10Q6XYQ8 523 aa16.46■□□□□ 0.22
TPM3-205ENST00000328159 ZNF720Q7Z2F6 126 aa16.46■□□□□ 0.22
TPM3-205ENST00000328159 FAM178BQ8IXR5 827 aa16.46■□□□□ 0.22
TPM3-205ENST00000328159 DAW1Q8N136 415 aa16.46■□□□□ 0.22
TPM3-205ENST00000328159 OPTNQ96CV9 577 aa16.46■□□□□ 0.22
TPM3-205ENST00000328159 CCDC43Q96MW1 224 aaKnown RBP16.46■□□□□ 0.22
TPM3-205ENST00000328159 AGPAT5Q9NUQ2 364 aa16.46■□□□□ 0.22
TPM3-205ENST00000328159 FAM184BQ9ULE4 1060 aa16.46■□□□□ 0.22
TPM3-205ENST00000328159 PCDHA10Q9Y5I2 948 aa16.46■□□□□ 0.22
TPM3-205ENST00000328159 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.46■□□□□ 0.22
TPM3-205ENST00000328159 ZMYM2Q9UBW7 1377 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 SPATA31C2B4DYI2 1134 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 NR3C1P04150 777 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 HERVK_113P62684 666 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 CNTN2Q02246 1040 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 KCNA1Q09470 495 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 STXBP2Q15833 593 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 TRIM65Q6PJ69 517 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 FRMD5Q7Z6J6 570 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 NCAPG2Q86XI2 1143 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 SMAP1Q8IYB5 467 aaPredicted RBP16.45■□□□□ 0.22
TPM3-205ENST00000328159 ZNF397Q8NF99 534 aaPredicted RBP16.45■□□□□ 0.22
TPM3-205ENST00000328159 PAGR1Q9BTK6 254 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 MMRN2Q9H8L6 949 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 ANKEF1Q9NU02 776 aa16.45■□□□□ 0.22
TPM3-205ENST00000328159 TGFB1I1O43294 461 aa16.44■□□□□ 0.22
TPM3-205ENST00000328159 GRIN3BO60391 1043 aa16.44■□□□□ 0.22
TPM3-205ENST00000328159 CNMDO75829 334 aa16.44■□□□□ 0.22
TPM3-205ENST00000328159 GTF2F1P35269 517 aaKnown RBP eCLIP16.44■□□□□ 0.22
TPM3-205ENST00000328159 MOGSQ13724 837 aa16.44■□□□□ 0.22
TPM3-205ENST00000328159 PNMA8AQ86V59 439 aaPredicted RBP16.44■□□□□ 0.22
TPM3-205ENST00000328159 SMCR8Q8TEV9 937 aaPredicted RBP16.44■□□□□ 0.22
TPM3-205ENST00000328159 CHP1Q99653 195 aa16.44■□□□□ 0.22
TPM3-205ENST00000328159 JPH1Q9HDC5 661 aaPredicted RBP16.44■□□□□ 0.22
TPM3-205ENST00000328159 FAM207AQ9NSI2 230 aaPredicted RBP16.44■□□□□ 0.22
TPM3-205ENST00000328159 PCDHB13Q9Y5F0 798 aa16.44■□□□□ 0.22
TPM3-205ENST00000328159 BACH1O14867 736 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 SLC16A3O15427 465 aaKnown RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 USO1O60763 962 aaKnown RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 EIF3JO75822 258 aaKnown RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 ALDH5A1P51649 535 aaPredicted RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 MEA1Q16626 185 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 NFIL3Q16649 462 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 XKR9Q5GH70 373 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 LDLRAD1Q5T700 205 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 WDR59Q6PJI9 974 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 MAEAQ7L5Y9 396 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 FASTKD5Q7L8L6 764 aaKnown RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 TIPINQ9BVW5 301 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 STRA6Q9BX79 667 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 ZNHIT6Q9NWK9 470 aaKnown RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 SLC9A2Q9UBY0 812 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 ARMCX3Q9UH62 379 aaPredicted RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 PHLPP2Q6ZVD8 1323 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 TMEM150BA6NC51 233 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 POTEB2H3BUK9 544 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 EPHB6O15197 1021 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 CLIC2O15247 247 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 PSAPP07602 524 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 MAPTP10636 758 aaKnown RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 OSBPP22059 807 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 ICAM3P32942 547 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 KCNMA1Q12791 1236 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 UTP14CQ5TAP6 766 aaKnown RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 CCDC155Q8N6L0 562 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 ACRBPQ8NEB7 543 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 NEK11Q8NG66 645 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 EDEM3Q9BZQ6 932 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 GABBR1Q9UBS5 961 aa16.43■□□□□ 0.22
TPM3-205ENST00000328159 EPN1Q9Y6I3 576 aaPredicted RBP16.43■□□□□ 0.22
TPM3-205ENST00000328159 DKC1O60832 514 aaKnown RBP eCLIP16.42■□□□□ 0.22
TPM3-205ENST00000328159 PPP1R37O75864 691 aa16.42■□□□□ 0.22
TPM3-205ENST00000328159 PPP2R3AQ06190 1150 aa16.42■□□□□ 0.22
TPM3-205ENST00000328159 ALCAMQ13740 583 aa16.42■□□□□ 0.22
TPM3-205ENST00000328159 PLA2G4FQ68DD2 849 aa16.42■□□□□ 0.22
TPM3-205ENST00000328159 KSR1Q8IVT5 923 aa16.42■□□□□ 0.22
TPM3-205ENST00000328159 ATP6V0A1Q93050 837 aa16.42■□□□□ 0.22
TPM3-205ENST00000328159 METTL14Q9HCE5 456 aaKnown RBP16.42■□□□□ 0.22
TPM3-205ENST00000328159 LARSQ9P2J5 1176 aaKnown RBP16.42■□□□□ 0.22
TPM3-205ENST00000328159 DNAI1Q9UI46 699 aa16.42■□□□□ 0.22
TPM3-205ENST00000328159 ARID2Q68CP9 1835 aa16.42■□□□□ 0.22
TPM3-205ENST00000328159 SOWAHBA6NEL2 793 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 K7ENM7 598 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 DYNC1I1O14576 645 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 AKAP3O75969 853 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 NDUFA10O95299 355 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 SLC25A27O95847 323 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 EPB41P11171 864 aaKnown RBP16.41■□□□□ 0.22
TPM3-205ENST00000328159 PLS3P13797 630 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 CASP4P49662 377 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 NPEPPSP55786 919 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 ACTR2P61160 394 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 CDK17Q00537 523 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 KCNH2Q12809 1159 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 FSTL1Q12841 308 aa16.41■□□□□ 0.22
TPM3-205ENST00000328159 GPAT2Q6NUI2 795 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms