RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TMEM150BA6NC51 233 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 SEPT4O43236 478 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 DUSP11O75319 330 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 PPFIA4O75335 1185 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 DGKDQ16760 1214 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 DPCR1Q3MIW9 517 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 ANO6Q4KMQ2 910 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 GAS2L3Q86XJ1 694 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 CCDC65Q8IXS2 484 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 ATP8B4Q8TF62 1192 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 TIPINQ9BVW5 301 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 NIFKQ9BYG3 293 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 GTPBP4Q9BZE4 634 aaKnown RBP11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 CYP26B1Q9NR63 512 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 NRBP2Q9NSY0 501 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 PPME1Q9Y570 386 aa11.39□□□□□ -0.59
VIPAS39-201ENST00000327028 TBCAO75347 108 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 CAVIN2O95810 425 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 IDEP14735 1019 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 BMP6P22004 513 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 CPT1AP50416 773 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 NPEPPSP55786 919 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 EHHADHQ08426 723 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 ZNF658Q5TYW1 1059 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 ISM2Q6H9L7 571 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 BBXQ8WY36 941 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 CEP170P1Q96L14 293 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 UPF3AQ9H1J1 476 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 DNAJC25Q9H1X3 360 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 PANK4Q9NVE7 773 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 ERAP1Q9NZ08 941 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 ODF2LQ9ULJ1 636 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 USO1O60763 962 aaKnown RBP11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 COASYQ13057 564 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 PLCB4Q15147 1175 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 BRDTQ58F21 947 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 C11orf57Q6ZUT1 292 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 MLKLQ8NB16 471 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 C16orf70Q9BSU1 422 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 ZNF215Q9UL58 517 aaPredicted RBP11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 PTCH2Q9Y6C5 1203 aa11.38□□□□□ -0.59
VIPAS39-201ENST00000327028 INHAP05111 366 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 ZNF286BP0CG31 522 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 GAP43P17677 238 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 MARK3P27448 753 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 CNGA1P29973 690 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 CCND3P30281 292 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 GJA9P57773 515 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 NKX3-2P78367 333 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 CACNB1Q02641 598 aaPredicted RBP11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 RAD51AP2Q09MP3 1159 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 GSE1Q14687 1217 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 TARBP2Q15633 366 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 DACH1Q9UI36 760 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 MYH11P35749 1972 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 SYNRGQ9UMZ2 1314 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 DGAT1O75907 488 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 RARBP10826 455 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 GRK4P32298 578 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 RFC5P40937 340 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 ZNF131P52739 623 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 PSMD2Q13200 908 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 MTERF2Q49AM1 385 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 TRMT1LQ7Z2T5 733 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 CEP89Q96ST8 783 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 NAT10Q9H0A0 1025 aaKnown RBP11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 COL4A3BPQ9Y5P4 624 aa11.37□□□□□ -0.59
VIPAS39-201ENST00000327028 FRMPD3Q5JV73 1810 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 HBP1O60381 514 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 HIP1RO75146 1068 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 FAM13AO94988 1023 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 MAPK7Q13164 816 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 FSCN1Q16658 493 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 FAM200AQ8TCP9 573 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 SH2D3AQ9BRG2 576 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 ATP6V0A4Q9HBG4 840 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 PDLIM7Q9NR12 457 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 TRPC6Q9Y210 931 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 GDAQ9Y2T3 454 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 RSPH10B2B2RC85 870 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 F2P00734 622 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 RSPH10BP0C881 870 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 COBLL1Q53SF7 1204 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 CT47A1Q5JQC4 288 aaPredicted RBP11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 FAM26FQ5R3K3 315 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 DAW1Q8N136 415 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 MCPH1Q8NEM0 835 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 DRC1Q96MC2 740 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 BPIFA3Q9BQP9 254 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 PARVGQ9HBI0 331 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 SPC25Q9HBM1 224 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 SEL1LQ9UBV2 794 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 DDX20Q9UHI6 824 aaKnown RBP11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 PTPN22Q9Y2R2 807 aa11.36□□□□□ -0.59
VIPAS39-201ENST00000327028 COL1A2P08123 1366 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 FSD2A1L4K1 749 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 HSPA8P11142 646 aaKnown RBP11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 ZNF165P49910 485 aa11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 POLGP54098 1239 aaPredicted RBP11.35□□□□□ -0.59
VIPAS39-201ENST00000327028 EMC2Q15006 297 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms