RNA–Protein interactions for RNA: ENST00000324771.12

DDR1-223, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 5 BASIC

Gene DDR1, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-223	ENST00000324771	TRIP13	Q15645	432 aa	Predicted RBP	12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	KCNK18	Q7Z418	384 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	ZBTB8OS	Q8IWT0	167 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	MGARP	Q8TDB4	240 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	FAN1	Q9Y2M0	1017 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	NALCN	Q8IZF0	1738 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	NDUFAB1	O14561	156 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	MSH4	O15457	936 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	TUBB4B	P68371	445 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	C7orf25	Q9BPX7	421 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	JRKL	Q9Y4A0	524 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	SYNJ2BP-COX16	A0A087WUM0	186 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	AR	P10275	920 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	FER	P16591	822 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	SYCE1	Q8N0S2	351 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	MAGOHB	Q96A72	148 aa	Known RBP	12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	ELMO3	Q96BJ8	720 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	PSMD1	Q99460	953 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	COX16	Q9P0S2	106 aa		12.85	□□□□□ -0.35
DDR1-223	ENST00000324771	SLIT3	O75094	1523 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	MRC1	P22897	1456 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	PDS5A	Q29RF7	1337 aa	Known RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	ADAMTS3	O15072	1205 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	RPS6	P62753	249 aa	Known RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	DRAP1	Q14919	205 aa	Predicted RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	NBPF12	Q5TAG4	269 aa	Predicted RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	PPAN	Q9NQ55	473 aa	Known RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	GPRC5C	Q9NQ84	441 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	WDR64	B1ANS9	1081 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	CTNNA1	P35221	906 aa	Known RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	NSF	P46459	744 aa	Known RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	PPP2R5D	Q14738	602 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	PPP1R18	Q6NYC8	613 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	HAUS6	Q7Z4H7	955 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	TAAR1	Q96RJ0	339 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	ELP3	Q9H9T3	547 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	EHD2	Q9NZN4	543 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	TMEM150B	A6NC51	233 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	ANKRD65	E5RJM6	399 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	EBAG9	O00559	213 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	NFIB	O00712	420 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	P4HB	P07237	508 aa	Known RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	YARS	P54577	528 aa	Known RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	PTK2	Q05397	1052 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	DGKZ	Q13574	1117 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	BSPRY	Q5W0U4	402 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	CDR2L	Q86X02	465 aa	Predicted RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	MS4A14	Q96JA4	679 aa		12.84	□□□□□ -0.35
DDR1-223	ENST00000324771	GLIS2	Q9BZE0	524 aa	Predicted RBP	12.84	□□□□□ -0.35
DDR1-223	ENST00000324771		A0A0U1RQJ8	604 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	SPDYE2B	A6NHP3	402 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	MYO1F	O00160	1098 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	VIM	P08670	466 aa	Known RBP	12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	SPDYE6	P0CI01	402 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	LACTB	P83111	547 aa	Predicted RBP	12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	XXYLT1	Q8NBI6	393 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	NSUN6	Q8TEA1	469 aa	Known RBP	12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	TMEM143	Q96AN5	459 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	IQCD	Q96DY2	449 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	PLCD4	Q9BRC7	762 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	CAPN11	Q9UMQ6	739 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	USP20	Q9Y2K6	914 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	EMSY	Q7Z589	1322 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	CASP4	P49662	377 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	PLTP	P55058	493 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	ERVK-24	P63145	666 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	NAALADL2	Q58DX5	795 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	DACT2	Q5SW24	774 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	LRRN4CL	Q8ND94	238 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	SLC10A4	Q96EP9	437 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	IL17RA	Q96F46	866 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	NAP1L3	Q99457	506 aa	Predicted RBP	12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	MAK16	Q9BXY0	300 aa	Known RBP	12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	RIOX1	Q9H6W3	641 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	TYW1	Q9NV66	732 aa	Known RBP	12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	HACL1	Q9UJ83	578 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	THAP12	O43422	761 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	IFRD2	Q12894	506 aa	Predicted RBP	12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	MIS18BP1	Q6P0N0	1132 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	RUSC1	Q9BVN2	902 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	TMEM206	Q9H813	350 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	NFU1	Q9UMS0	254 aa		12.83	□□□□□ -0.36
DDR1-223	ENST00000324771	EYA4	O95677	639 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	PSAP	P07602	524 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	CYP11B2	P19099	503 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	IL17A	Q16552	155 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	STYK1	Q6J9G0	422 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	C7orf31	Q8N865	590 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	SEMA6B	Q9H3T3	888 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	KCNH7	Q9NS40	1196 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	KBTBD4	Q9NVX7	518 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	TSKS	Q9UJT2	592 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	NR3C2	P08235	984 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	NT5C2	P49902	561 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	MFAP3	P55082	362 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	KCTD19	Q17RG1	926 aa	Predicted RBP	12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	EPC2	Q52LR7	807 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	MICALL1	Q8N3F8	863 aa		12.82	□□□□□ -0.36
DDR1-223	ENST00000324771	PDGFD	Q9GZP0	370 aa	Predicted RBP	12.82	□□□□□ -0.36

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