RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 ATP8B3O60423 1300 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 RAD17O75943 681 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 LDHAP00338 332 aaKnown RBP11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 OSTNP61366 133 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 PLCB4Q15147 1175 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 LLGL1Q15334 1064 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 FAM83BQ5T0W9 1011 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 TBC1D9BQ66K14 1250 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 BRINP3Q76B58 766 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 DYDC2Q96IM9 177 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 ATP6V0A4Q9HBG4 840 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 ABCB11O95342 1321 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 USP17L10C9JJH3 530 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 GYS2P54840 703 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 MRPS25P82663 173 aaKnown RBP11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 EXOSC10Q01780 885 aaKnown RBP11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 SUPT20HL1Q3ZLR7 823 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 TCP11Q8WWU5 503 aa11.74□□□□□ -0.53
SNRNP200-201ENST00000323853 CLTCQ00610 1675 aaKnown RBP11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 PNPLA7Q6ZV29 1317 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 TOM1L1O75674 476 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 KIF22Q14807 665 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 ZNF341Q9BYN7 854 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 ZNF335Q9H4Z2 1342 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 SPDYE16A6NNV3 312 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 TJP3O95049 919 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 TTC4O95801 387 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 COG7P83436 770 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 RBBP5Q15291 538 aaKnown RBP11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 TXNRD1Q16881 649 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 SPDYE2Q495Y8 402 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 FAM182BQ5T319 152 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 ZNF609O15014 1411 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 TTI1O43156 1089 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 PSMA2P25787 234 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 STX1BP61266 288 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 GPC5P78333 572 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 RSPH3Q86UC2 560 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 ERICH1Q86X53 443 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 SCYL3Q8IZE3 742 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 OSBPL9Q96SU4 736 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 INTS2Q9H0H0 1204 aaKnown RBP11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 TERF2Q15554 542 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 GSPT2Q8IYD1 628 aaKnown RBP11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 FBXO41Q8TF61 875 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 HAUS8Q9BT25 410 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 NCK2O43639 380 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 GH2P01242 217 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 RPSAP08865 295 aaKnown RBP11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 MTMR1Q13613 665 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 STOX1Q6ZVD7 989 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 SGMS1Q86VZ5 419 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 KLHL29Q96CT2 875 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 FBXO2Q9UK22 296 aaPredicted RBP11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 PPP1R9AQ9ULJ8 1098 aa11.73□□□□□ -0.53
SNRNP200-201ENST00000323853 MIF4GDA9UHW6 222 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 FOXN1O15353 648 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 GPC4O75487 556 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 ATP2C1P98194 919 aaPredicted RBP11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 THOC5Q13769 683 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 KNOP1Q1ED39 458 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 MUM1L1Q5H9M0 696 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 GINM1Q9NU53 330 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 TTC36A6NLP5 189 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 TEX33O43247 280 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 RCSD1Q6JBY9 416 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 PDXDC2PQ6P474 469 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 KRT27Q7Z3Y8 459 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 ADGRF4Q8IZF3 695 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 SDCCAG3Q96C92 435 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 CEP95Q96GE4 821 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 ACSL3O95573 720 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 DNAAF3Q8N9W5 541 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 PYROXD1Q8WU10 500 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 PPP1R16BQ96T49 567 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 MAGED2Q9UNF1 606 aaPredicted RBP11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 ADGRG1Q9Y653 693 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 ORC4O43929 436 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 SEMA3FQ13275 785 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 E2F5Q15329 346 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 NFRKBQ6P4R8 1299 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 RTKN2Q8IZC4 609 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 AP5M1Q9H0R1 490 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 CPVLQ9H3G5 476 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 NEXMIFQ5QGS0 1516 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 POTEB3A0JP26 581 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 POTECB2RU33 542 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 KPNA2P52292 529 aaKnown RBP11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 POTEBQ6S5H4 581 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 PCGF5Q86SE9 256 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 FAM149B1Q96BN6 582 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 ATG16L1Q676U5 607 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 FAM20AQ96MK3 541 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 SAYSD1Q9NPB0 183 aa11.72□□□□□ -0.53
SNRNP200-201ENST00000323853 EPS15L1Q9UBC2 864 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms