RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 HBP1O60381 514 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 IFNAR1P17181 557 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 COL9A1P20849 921 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 KLRC1P26715 233 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 SLC26A2P50443 739 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 CLCN3P51790 818 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 LEXMQ3ZCV2 418 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 ZNF746Q6NUN9 644 aaPredicted RBP14.01□□□□□ -0.17
TPM3-204ENST00000323144 SWSAP1Q6NVH7 229 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 MIS18BP1Q6P0N0 1132 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 NPAS4Q8IUM7 802 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.01□□□□□ -0.17
TPM3-204ENST00000323144 CLP1Q92989 425 aaKnown RBP14.01□□□□□ -0.17
TPM3-204ENST00000323144 AIFM3Q96NN9 605 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 OSMRQ99650 979 aa14.01□□□□□ -0.17
TPM3-204ENST00000323144 NOC2LQ9Y3T9 749 aaKnown RBP14.01□□□□□ -0.17
TPM3-204ENST00000323144 MYO7AQ13402 2215 aa14□□□□□ -0.17
TPM3-204ENST00000323144 ZNF862O60290 1169 aa14□□□□□ -0.17
TPM3-204ENST00000323144 TBX10O75333 385 aa14□□□□□ -0.17
TPM3-204ENST00000323144 TDP2O95551 362 aa14□□□□□ -0.17
TPM3-204ENST00000323144 MMP1P03956 469 aa14□□□□□ -0.17
TPM3-204ENST00000323144 VTNP04004 478 aa14□□□□□ -0.17
TPM3-204ENST00000323144 RPLP2P05387 115 aaKnown RBP14□□□□□ -0.17
TPM3-204ENST00000323144 GTF2F1P35269 517 aaKnown RBP eCLIP14□□□□□ -0.17
TPM3-204ENST00000323144 EVCP57679 992 aa14□□□□□ -0.17
TPM3-204ENST00000323144 PRKCEQ02156 737 aa14□□□□□ -0.17
TPM3-204ENST00000323144 COL19A1Q14993 1142 aa14□□□□□ -0.17
TPM3-204ENST00000323144 NPY5RQ15761 445 aa14□□□□□ -0.17
TPM3-204ENST00000323144 KIZQ2M2Z5 673 aa14□□□□□ -0.17
TPM3-204ENST00000323144 RUFY3Q7L099 469 aa14□□□□□ -0.17
TPM3-204ENST00000323144 FAM228AQ86W67 206 aa14□□□□□ -0.17
TPM3-204ENST00000323144 CKAP2LQ8IYA6 745 aa14□□□□□ -0.17
TPM3-204ENST00000323144 CMTR2Q8IYT2 770 aaKnown RBP14□□□□□ -0.17
TPM3-204ENST00000323144 KIAA0319LQ8IZA0 1049 aa14□□□□□ -0.17
TPM3-204ENST00000323144 C11orf84Q9BUA3 381 aaPredicted RBP14□□□□□ -0.17
TPM3-204ENST00000323144 EPHX3Q9H6B9 360 aa14□□□□□ -0.17
TPM3-204ENST00000323144 GABBR1Q9UBS5 961 aa14□□□□□ -0.17
TPM3-204ENST00000323144 TCEAL9Q9UHQ7 104 aa14□□□□□ -0.17
TPM3-204ENST00000323144 PCDHGC5Q9Y5F6 944 aa14□□□□□ -0.17
TPM3-204ENST00000323144 FAM86C2PA6NEL3 165 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 MSH4O15457 936 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 DNAJB1P25685 340 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 PSMA5P28066 241 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 GNA11P29992 359 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 CIITAP33076 1130 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 BMPR1AP36894 532 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 AKAP17AQ02040 695 aaKnown RBP13.99□□□□□ -0.17
TPM3-204ENST00000323144 HYAL1Q12794 435 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 NFX1Q12986 1120 aaKnown RBP13.99□□□□□ -0.17
TPM3-204ENST00000323144 STK3Q13188 491 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 CLUL1Q15846 466 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 PTCRAQ6ISU1 281 aaPredicted RBP13.99□□□□□ -0.17
TPM3-204ENST00000323144 EP400NLQ6ZTU2 488 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 SMAP1Q8IYB5 467 aaPredicted RBP13.99□□□□□ -0.17
TPM3-204ENST00000323144 LRRC71Q8N4P6 559 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 NEK9Q8TD19 979 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 PABPC5Q96DU9 382 aaKnown RBP13.99□□□□□ -0.17
TPM3-204ENST00000323144 ZNF668Q96K58 619 aaPredicted RBP13.99□□□□□ -0.17
TPM3-204ENST00000323144 FTHL17Q9BXU8 183 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 UNC45AQ9H3U1 944 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 ZSWIM6Q9HCJ5 1215 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 ALG13Q9NP73 1137 aaKnown RBP13.99□□□□□ -0.17
TPM3-204ENST00000323144 MAFBQ9Y5Q3 323 aaPredicted RBP13.99□□□□□ -0.17
TPM3-204ENST00000323144 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
TPM3-204ENST00000323144 TMEM150BA6NC51 233 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 LINC01565O15544 149 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 OATP04181 439 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 PSAPP07602 524 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 SARSP49591 514 aaKnown RBP13.98□□□□□ -0.17
TPM3-204ENST00000323144 DLX2Q07687 328 aaPredicted RBP13.98□□□□□ -0.17
TPM3-204ENST00000323144 CAMK1Q14012 370 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 ZNF484Q5JVG2 852 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 ADGRD2Q7Z7M1 963 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 LINC01465Q8N7H1 131 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 BBXQ8WY36 941 aaPredicted RBP13.98□□□□□ -0.17
TPM3-204ENST00000323144 C11orf16Q9NQ32 467 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 TBC1D22BQ9NU19 505 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 CLDND1Q9NY35 253 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 RWDD3Q9Y3V2 267 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 SAMM50Q9Y512 469 aa13.98□□□□□ -0.17
TPM3-204ENST00000323144 WDR64B1ANS9 1081 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 GAS7O60861 476 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 RPS6KA5O75582 802 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 ITGB1P05556 798 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 IRS1P35568 1242 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 LTBRP36941 435 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 NLRP5P59047 1200 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 LRCH2Q5VUJ6 765 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 MCTP2Q6DN12 878 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 METTL13Q8N6R0 699 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 BICD2Q8TD16 824 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 TBCKQ8TEA7 893 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 SLC5A5Q92911 643 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 TNPO1Q92973 898 aaKnown RBP13.97□□□□□ -0.17
TPM3-204ENST00000323144 ADAM2Q99965 735 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 LMAN2LQ9H0V9 348 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 ST3GAL5Q9UNP4 418 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 PCDHA10Q9Y5I2 948 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 CYP46A1Q9Y6A2 500 aa13.97□□□□□ -0.17
TPM3-204ENST00000323144 GRXCR2A6NFK2 248 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms