RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 H7C0C1 242 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 IPO5O00410 1097 aaKnown RBP17.82■□□□□ 0.44
CLIP4-201ENST00000320081 ATP5DP30049 168 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 ATP5OP48047 213 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 ERVK-24P63145 666 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 DR1Q01658 176 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 FAM47EQ6ZV65 393 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 COG1Q8WTW3 980 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 FAM213AQ9BRX8 229 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 FBXO28Q9NVF7 368 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 ANAPC7Q9UJX3 599 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 NOD1Q9Y239 953 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 A0A087X0B3 334 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 EIF4E1BA6NMX2 242 aaKnown RBP17.82■□□□□ 0.44
CLIP4-201ENST00000320081 LRRC14Q15048 493 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 TMED2Q15363 201 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 C11orf70Q9BRQ4 267 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 RIOK1Q9BRS2 568 aaKnown RBP17.82■□□□□ 0.44
CLIP4-201ENST00000320081 PASKQ96RG2 1323 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 NDUFB10O96000 172 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 GUCY1A3Q02108 690 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 EPC2Q52LR7 807 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 FBXO33Q7Z6M2 555 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 RNF25Q96BH1 459 aaPredicted RBP17.82■□□□□ 0.44
CLIP4-201ENST00000320081 CAPN11Q9UMQ6 739 aa17.82■□□□□ 0.44
CLIP4-201ENST00000320081 DCAF8L1A6NGE4 600 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 PSMD2Q13200 908 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 STMN2Q93045 179 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 LXNQ9BS40 222 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 FAM217BQ9NTX9 383 aaPredicted RBP17.81■□□□□ 0.44
CLIP4-201ENST00000320081 GOLGA4Q13439 2230 aaKnown RBP17.81■□□□□ 0.44
CLIP4-201ENST00000320081 STAMBPO95630 424 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 PMS1P54277 932 aaKnown RBP17.81■□□□□ 0.44
CLIP4-201ENST00000320081 USP14P54578 494 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 ZNF543Q08ER8 600 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 MTMR1Q13613 665 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.81■□□□□ 0.44
CLIP4-201ENST00000320081 MICAL1Q8TDZ2 1067 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 EIF2AK1Q9BQI3 630 aaKnown RBP17.81■□□□□ 0.44
CLIP4-201ENST00000320081 PVALEFA0A1B0GWK0 134 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 ATP8B1O43520 1251 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 GAP43P17677 238 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 BASP1P80723 227 aaKnown RBP17.81■□□□□ 0.44
CLIP4-201ENST00000320081 ITIH3Q06033 890 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 KRT81Q14533 505 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 SLC30A5Q8TAD4 765 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 MASTLQ96GX5 879 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 PNKPQ96T60 521 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 CCSER1Q9C0I3 900 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 CEP72Q9P209 647 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 K7ERI5 159 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 FTLP02792 175 aaPredicted RBP17.81■□□□□ 0.44
CLIP4-201ENST00000320081 MYBP10242 640 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 NEDD9Q14511 834 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 ZBTB8OSQ8IWT0 167 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 DCLK2Q8N568 766 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 ATP6V0A1Q93050 837 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 KLHL14Q9P2G3 628 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 FEZ2Q9UHY8 353 aaPredicted RBP17.81■□□□□ 0.44
CLIP4-201ENST00000320081 STK24Q9Y6E0 443 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 ZHX2Q9Y6X8 837 aa17.81■□□□□ 0.44
CLIP4-201ENST00000320081 FYB2Q5VWT5 728 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 ELMO3Q96BJ8 720 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 SLC4A9Q96Q91 983 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 STAM2O75886 525 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 ABL1P00519 1130 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 C2CD6Q53TS8 623 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 HIBCHQ6NVY1 386 aaPredicted RBP17.8■□□□□ 0.44
CLIP4-201ENST00000320081 RNF8O76064 485 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 MAGOHP61326 146 aaKnown RBP17.8■□□□□ 0.44
CLIP4-201ENST00000320081 ATP11AP98196 1134 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 ELAC2Q9BQ52 826 aaKnown RBP17.8■□□□□ 0.44
CLIP4-201ENST00000320081 REEP2Q9BRK0 252 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 ZWILCHQ9H900 591 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 KLHL11Q9NVR0 708 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 HPSEQ9Y251 543 aa17.8■□□□□ 0.44
CLIP4-201ENST00000320081 RSPH10B2B2RC85 870 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 ECEL1O95672 775 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 RSPH10BP0C881 870 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 BBS9Q3SYG4 887 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 RCSD1Q6JBY9 416 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 RNF207Q6ZRF8 634 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 CNOT8Q9UFF9 292 aaKnown RBP17.79■□□□□ 0.44
CLIP4-201ENST00000320081 AKT3Q9Y243 479 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 FHOD1Q9Y613 1164 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 DENND3A2RUS2 1198 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 ATMINO43313 823 aaPredicted RBP17.79■□□□□ 0.44
CLIP4-201ENST00000320081 CDC42EP5Q6NZY7 148 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 PTF1AQ7RTS3 328 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 RBM12Q9NTZ6 932 aaKnown RBP17.79■□□□□ 0.44
CLIP4-201ENST00000320081 EMSYQ7Z589 1322 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 EIF3CLB5ME19 914 aaKnown RBP17.79■□□□□ 0.44
CLIP4-201ENST00000320081 MYCP01106 439 aaPredicted RBP17.79■□□□□ 0.44
CLIP4-201ENST00000320081 KLRC1P26715 233 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 BAG6P46379 1132 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 RPUSD2Q8IZ73 545 aaKnown RBP17.79■□□□□ 0.44
CLIP4-201ENST00000320081 C1orf54Q8WWF1 131 aa17.79■□□□□ 0.44
CLIP4-201ENST00000320081 EIF3CQ99613 913 aaKnown RBP17.79■□□□□ 0.44
CLIP4-201ENST00000320081 TXNDC9O14530 226 aa17.78■□□□□ 0.44
CLIP4-201ENST00000320081 CSPG5O95196 566 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms