RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 MYL3P08590 195 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 KAZNQ674X7 775 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 KCNB2Q92953 911 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 TBC1D31Q96DN5 1066 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GDAP1L1Q96MZ0 367 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 VCPKMTQ9H867 229 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 KDM4FA0A1W2PPD8 638 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 PHKA2P46019 1235 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GABPAQ06546 454 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 IFRD2Q12894 506 aaPredicted RBP13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 PPP2R5DQ14738 602 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 DNAJC24Q6P3W2 148 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 MYOZ2Q9NPC6 264 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 LRFN2Q9ULH4 789 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CLDN3O15551 220 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ZNF280CQ8ND82 737 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 MYOM1P52179 1685 aa13.88□□□□□ -0.19
SH3PXD2A-201ENST00000315994 PGRMC1O00264 195 aaKnown RBP13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 TBX3O15119 743 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SLC16A4O15374 487 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 EYA4O95677 639 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 C2orf40Q9H1Z8 148 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GOLGA8KD6RF30 607 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 MAP7D1Q3KQU3 841 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 KCNV1Q6PIU1 500 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 DHX40Q8IX18 779 aaKnown RBP13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 TAF6LQ9Y6J9 622 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ASB14A6NK59 587 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ABL1P00519 1130 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CASP7P55210 303 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CATSPER4Q7RTX7 472 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 POLLQ9UGP5 575 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 DNAJC12Q9UKB3 198 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 PCDHA10Q9Y5I2 948 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 NAA35Q5VZE5 725 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 RFX6Q8HWS3 928 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 PSPC1Q8WXF1 523 aaKnown RBP13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SENP2Q9HC62 589 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ABHD10Q9NUJ1 306 aa13.87□□□□□ -0.19
SH3PXD2A-201ENST00000315994 DENND3A2RUS2 1198 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 HSPA6P17066 643 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CD58P19256 250 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 VPS41P49754 854 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 IRX5P78411 483 aaPredicted RBP13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GUCY2DQ02846 1103 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CEP85LQ5SZL2 805 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 BSPRYQ5W0U4 402 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 FAM49AQ9H0Q0 323 aaPredicted RBP13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 FAM114A2Q9NRY5 505 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 PRR12Q9ULL5 1215 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CRCPO75575 148 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 FDPSP14324 419 aaKnown RBP13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CLEC10AQ8IUN9 316 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 NME8Q8N427 588 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 MAGOHBQ96A72 148 aaKnown RBP13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 TEX13BQ9BXU2 312 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SLC9A2Q9UBY0 812 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ATP8B3O60423 1300 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 APBA1Q02410 837 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ALKBH5Q6P6C2 394 aaKnown RBP13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 METTL16Q86W50 562 aaKnown RBP13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 AFAP1L2Q8N4X5 818 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CCT6BQ92526 530 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ATP2A3Q93084 1043 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GMPSP49915 693 aaPredicted RBP13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 KCNH2Q12809 1159 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ANGEL2Q5VTE6 544 aaKnown RBP13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ELP3Q9H9T3 547 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 HPS5Q9UPZ3 1129 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GOLGA8SH3BPF8 625 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CTDNEP1O95476 244 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 RNASELQ05823 741 aaKnown RBP13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GEN1Q17RS7 908 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CTAGE3PQ8IX95 158 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 RHOT2Q8IXI1 618 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 THNSL1Q8IYQ7 743 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 TIPINQ9BVW5 301 aa13.86□□□□□ -0.19
SH3PXD2A-201ENST00000315994 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 H7C0C1 242 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 FOXN1O15353 648 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 FTCDO95954 541 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ATP5OP48047 213 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 MICALL1Q8N3F8 863 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CCDC110Q8TBZ0 833 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ZMYND12Q9H0C1 365 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 POLR3FQ9H1D9 316 aaPredicted RBP13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 GINM1Q9NU53 330 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SALL3Q9BXA9 1300 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SYNJ2BP-COX16A0A087WUM0 186 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 I3L4J1 428 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 CYP27A1Q02318 531 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ELMSAN1Q6PJG2 1045 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 SPATA33Q96N06 139 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 JMJD4Q9H9V9 463 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 COX16Q9P0S2 106 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 HACL1Q9UJ83 578 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 PPFIA4O75335 1185 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 ZNF667Q5HYK9 610 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 FAM149B1Q96BN6 582 aa13.85□□□□□ -0.19
SH3PXD2A-201ENST00000315994 HEXIM2Q96MH2 286 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms