RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 TRPV6Q9H1D0 765 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 HPCAL4Q9UM19 191 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 LZTS1Q9Y250 596 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 NR2E1Q9Y466 385 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 IGKV6D-41A0A0C4DH26 115 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 TTC36A6NLP5 189 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 USP17L12C9JPN9 530 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 USP17L21D6R901 530 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 LILRB5O75023 590 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 PPFIA3O75145 1194 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 C6orf222P0C671 652 aaPredicted RBP4.68□□□□□ -1.66
POLR2B-201ENST00000314595 NEFHP12036 1026 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 PMLP29590 882 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 KRT85P78386 507 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 KIAA1755Q5JYT7 1200 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 CWF19L1Q69YN2 538 aaKnown RBP4.68□□□□□ -1.66
POLR2B-201ENST00000314595 OR8K1Q8NGG5 319 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 DRC1Q96MC2 740 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 NECTIN4Q96NY8 510 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 LLPHQ9BRT6 129 aaKnown RBP4.68□□□□□ -1.66
POLR2B-201ENST00000314595 TNMDQ9H2S6 317 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 SORCS3Q9UPU3 1222 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 CHMP3Q9Y3E7 222 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 DNAH12Q6ZR08 3092 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 C5orf60A6NFR6 353 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 A6NHS1 94 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 FAM196BA6NMK8 535 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 STX10O60499 249 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 RAB11FIP3O75154 756 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 CTDNEP1O95476 244 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 RPLP2P05387 115 aaKnown RBP4.68□□□□□ -1.66
POLR2B-201ENST00000314595 SLURP2P0DP57 97 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 SMPD1P17405 629 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 ELF1P32519 619 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 TBC1D25Q3MII6 688 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 RCSD1Q6JBY9 416 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 PHLDB3Q6NSJ2 640 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 LRRC8DQ7L1W4 858 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 FRMD5Q7Z6J6 570 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 NCAPG2Q86XI2 1143 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 CD302Q8IX05 232 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 CRACR2BQ8N4Y2 399 aaPredicted RBP4.68□□□□□ -1.66
POLR2B-201ENST00000314595 AENQ8WTP8 325 aaKnown RBP4.68□□□□□ -1.66
POLR2B-201ENST00000314595 RSPH1Q8WYR4 309 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 DDX1Q92499 740 aaKnown RBP4.68□□□□□ -1.66
POLR2B-201ENST00000314595 DHX38Q92620 1227 aaKnown RBP4.68□□□□□ -1.66
POLR2B-201ENST00000314595 DDX11Q96FC9 970 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 PURBQ96QR8 312 aaKnown RBP4.68□□□□□ -1.66
POLR2B-201ENST00000314595 IER2Q9BTL4 223 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 AP5M1Q9H0R1 490 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 ATP6V0A4Q9HBG4 840 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 GOPCQ9HD26 462 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 ARFGAP3Q9NP61 516 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 HOMER3Q9NSC5 361 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 CACNA2D2Q9NY47 1150 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 USTQ9Y2C2 406 aa4.68□□□□□ -1.66
POLR2B-201ENST00000314595 LGR5O75473 907 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 NOVP48745 357 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 BYSLQ13895 437 aaKnown RBP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 IKBKEQ14164 716 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 ZC3H14Q6PJT7 736 aaKnown RBP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 LEKR1Q6ZMV7 388 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 KLHDC4Q8TBB5 520 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 GOLGA1Q92805 767 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 PPP2R3CQ969Q6 453 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 RXFP3Q9NSD7 469 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 NYAP2Q9P242 653 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 SQORQ9Y6N5 450 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 ARHGAP6O43182 974 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 PROS1P07225 676 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 HOXB8P17481 243 aaPredicted RBP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 SARSP49591 514 aaKnown RBP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 FAM160A1Q05DH4 1040 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 GPM6BQ13491 265 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 OTUD6BQ8N6M0 293 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 SUMF1Q8NBK3 374 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 ANKRD20A12PQ8NF67 263 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 PANX2Q96RD6 677 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 RIOK1Q9BRS2 568 aaKnown RBP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 PDE11AQ9HCR9 933 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 RTEL1Q9NZ71 1219 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 PPP2R2CQ9Y2T4 447 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 U3KPZ7 1027 aaPredicted RBP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 FNDC1Q4ZHG4 1894 aaPredicted RBP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 TAF4O00268 1085 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 EIF3HO15372 352 aaKnown RBP eCLIP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 NBNO60934 754 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 SMC2O95347 1197 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 BMPR1AP36894 532 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 ARHGAP25P42331 645 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 IRAK1P51617 712 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 CCL23P55773 120 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 NLRP12P59046 1061 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 GHRHRQ02643 423 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 PPP2R3AQ06190 1150 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 ACTN3Q08043 901 aaPredicted RBP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 MTMR3Q13615 1198 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 CASP8Q14790 479 aa4.67□□□□□ -1.66
POLR2B-201ENST00000314595 CMTR2Q8IYT2 770 aaKnown RBP4.67□□□□□ -1.66
POLR2B-201ENST00000314595 MED15Q96RN5 788 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms