RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 TIGD5Q53EQ6 642 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 KRT40Q6A162 431 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 KRT25Q7Z3Z0 450 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 MRPL38Q96DV4 380 aaKnown RBP14.33□□□□□ -0.12
CKS2-201ENST00000314355 NAP1L4Q99733 375 aaKnown RBP14.33□□□□□ -0.12
CKS2-201ENST00000314355 LARP6Q9BRS8 491 aaKnown RBP14.33□□□□□ -0.12
CKS2-201ENST00000314355 C11orf84Q9BUA3 381 aaPredicted RBP14.33□□□□□ -0.12
CKS2-201ENST00000314355 BRMS1Q9HCU9 246 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 IGSF9BQ9UPX0 1349 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 KDM3AQ9Y4C1 1321 aa14.33□□□□□ -0.12
CKS2-201ENST00000314355 CHMP2AO43633 222 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 NCK2O43639 380 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 DKC1O60832 514 aaKnown RBP eCLIP14.32□□□□□ -0.12
CKS2-201ENST00000314355 ZSCAN20P17040 1043 aaPredicted RBP14.32□□□□□ -0.12
CKS2-201ENST00000314355 IBSPP21815 317 aaPredicted RBP14.32□□□□□ -0.12
CKS2-201ENST00000314355 CRYBB1P53674 252 aaPredicted RBP14.32□□□□□ -0.12
CKS2-201ENST00000314355 CDC42EP1Q00587 391 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 Q4G0T1 1027 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 SPOUT1Q5T280 376 aaKnown RBP14.32□□□□□ -0.12
CKS2-201ENST00000314355 EP400NLQ6ZTU2 488 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 MIER3Q7Z3K6 550 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 NPAS4Q8IUM7 802 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 PPP2R3CQ969Q6 453 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 ZBTB10Q96DT7 871 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 SCLT1Q96NL6 688 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 OSBPL7Q9BZF2 842 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 LMAN2LQ9H0V9 348 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 C1orf112Q9NSG2 853 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 AKT3Q9Y243 479 aa14.32□□□□□ -0.12
CKS2-201ENST00000314355 MSH4O15457 936 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 BMPR1AP36894 532 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 DNM2P50570 870 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 TFF2Q03403 129 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 NAALADL2Q58DX5 795 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 EFCAB12Q6NXP0 572 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 MOXD1Q6UVY6 613 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 SPRED2Q7Z698 418 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 KIAA0319LQ8IZA0 1049 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 BANK1Q8NDB2 785 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 RDM1Q8NG50 284 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 PLVAPQ9BX97 442 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 AGO3Q9H9G7 860 aaKnown RBP14.31□□□□□ -0.12
CKS2-201ENST00000314355 AAASQ9NRG9 546 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 FAM50BQ9Y247 325 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 ADGRA3Q8IWK6 1321 aa14.31□□□□□ -0.12
CKS2-201ENST00000314355 PRRC2BQ5JSZ5 2229 aaKnown RBP14.31□□□□□ -0.12
CKS2-201ENST00000314355 DGKIO75912 1065 aa14.3□□□□□ -0.12
CKS2-201ENST00000314355 BAG4O95429 457 aaKnown RBP14.3□□□□□ -0.12
CKS2-201ENST00000314355 OATP04181 439 aa14.3□□□□□ -0.12
CKS2-201ENST00000314355 BMP1P13497 986 aa14.3□□□□□ -0.12
CKS2-201ENST00000314355 TBC1D8BQ0IIM8 1120 aa14.3□□□□□ -0.12
CKS2-201ENST00000314355 LETM2Q2VYF4 491 aa14.3□□□□□ -0.12
CKS2-201ENST00000314355 PUS10Q3MIT2 529 aaKnown RBP14.3□□□□□ -0.12
CKS2-201ENST00000314355 SLC24A5Q71RS6 500 aa14.3□□□□□ -0.12
CKS2-201ENST00000314355 CMTR2Q8IYT2 770 aaKnown RBP14.3□□□□□ -0.12
CKS2-201ENST00000314355 DAGLBQ8NCG7 672 aa14.3□□□□□ -0.12
CKS2-201ENST00000314355 SLC5A5Q92911 643 aa14.3□□□□□ -0.12
CKS2-201ENST00000314355 NSUN3Q9H649 340 aaKnown RBP14.3□□□□□ -0.12
CKS2-201ENST00000314355 DDX25Q9UHL0 483 aaKnown RBP14.3□□□□□ -0.12
CKS2-201ENST00000314355 ST3GAL5Q9UNP4 418 aa14.3□□□□□ -0.12
CKS2-201ENST00000314355 MICAL3Q7RTP6 2002 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 CYP3A7-CYP3A51PA0A087WV96 503 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 C5orf67F2Z3F1 127 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 PFKFB2O60825 505 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 GCFC2P16383 781 aaKnown RBP14.29□□□□□ -0.12
CKS2-201ENST00000314355 CYP3A7P24462 503 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 SARSP49591 514 aaKnown RBP14.29□□□□□ -0.12
CKS2-201ENST00000314355 KCNQ1P51787 676 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 SCRN1Q12765 414 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 TRIM29Q14134 588 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 KIZQ2M2Z5 673 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 TMEM266Q2M3C6 531 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 XKR3Q5GH77 459 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 EXOC8Q8IYI6 725 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 ADAM2Q99965 735 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 JPH2Q9BR39 696 aaPredicted RBP14.29□□□□□ -0.12
CKS2-201ENST00000314355 UBE2ZQ9H832 354 aaPredicted RBP14.29□□□□□ -0.12
CKS2-201ENST00000314355 ATP6V0A4Q9HBG4 840 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 NOC2LQ9Y3T9 749 aaKnown RBP14.29□□□□□ -0.12
CKS2-201ENST00000314355 PCDHB12Q9Y5F1 795 aa14.29□□□□□ -0.12
CKS2-201ENST00000314355 ADAMTS3O15072 1205 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 HOXA2O43364 376 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 C22orf31O95567 290 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 VTNP04004 478 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 ATP4AP20648 1035 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 NLRP11P59045 1033 aaKnown RBP14.28□□□□□ -0.12
CKS2-201ENST00000314355 INF2Q27J81 1249 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 NEK8Q86SG6 692 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 RTN4RL1Q86UN2 441 aaPredicted RBP14.28□□□□□ -0.12
CKS2-201ENST00000314355 P2RX5Q93086 422 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 ZNF689Q96CS4 500 aaPredicted RBP14.28□□□□□ -0.12
CKS2-201ENST00000314355 FAM20AQ96MK3 541 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 PPP1R16BQ96T49 567 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 OSMRQ99650 979 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 INO80BQ9C086 356 aaPredicted RBP14.28□□□□□ -0.12
CKS2-201ENST00000314355 UNC45AQ9H3U1 944 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 RGS18Q9NS28 235 aa14.28□□□□□ -0.12
CKS2-201ENST00000314355 ORC3Q9UBD5 711 aaPredicted RBP14.28□□□□□ -0.12
CKS2-201ENST00000314355 SEPT9Q9UHD8 586 aaPredicted RBP14.28□□□□□ -0.12
CKS2-201ENST00000314355 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms