RNA–Protein interactions for RNA: ENST00000311873.9

ZC3HC1-201, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2 BASIC

Gene ZC3HC1, Length 2,017 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-201ENST00000311873 SYT2Q8N9I0 419 aaPredicted RBP12.88□□□□□ -0.35
ZC3HC1-201ENST00000311873 HPS3Q969F9 1004 aa12.88□□□□□ -0.35
ZC3HC1-201ENST00000311873 TRIM44Q96DX7 344 aaPredicted RBP12.88□□□□□ -0.35
ZC3HC1-201ENST00000311873 TRIM9Q9C026 710 aa12.88□□□□□ -0.35
ZC3HC1-201ENST00000311873 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.88□□□□□ -0.35
ZC3HC1-201ENST00000311873 UPF3AQ9H1J1 476 aaKnown RBP12.88□□□□□ -0.35
ZC3HC1-201ENST00000311873 AZI2Q9H6S1 392 aa12.88□□□□□ -0.35
ZC3HC1-201ENST00000311873 PCDHA5Q9Y5H7 936 aa12.88□□□□□ -0.35
ZC3HC1-201ENST00000311873 USO1O60763 962 aaKnown RBP12.87□□□□□ -0.35
ZC3HC1-201ENST00000311873 DPYDQ12882 1025 aa12.87□□□□□ -0.35
ZC3HC1-201ENST00000311873 FAM160B1Q5W0V3 765 aa12.87□□□□□ -0.35
ZC3HC1-201ENST00000311873 RINT1Q6NUQ1 792 aa12.87□□□□□ -0.35
ZC3HC1-201ENST00000311873 SV2BQ7L1I2 683 aa12.87□□□□□ -0.35
ZC3HC1-201ENST00000311873 DDX12PQ92771 950 aa12.87□□□□□ -0.35
ZC3HC1-201ENST00000311873 STK24Q9Y6E0 443 aa12.87□□□□□ -0.35
ZC3HC1-201ENST00000311873 SFI1A8K8P3 1242 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 H3BRB1 525 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 CCL5P13501 91 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 CPT1AP50416 773 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 HIC1Q14526 733 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 XKR3Q5GH77 459 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 PADI6Q6TGC4 694 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 PLPPR4Q7Z2D5 763 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 DNAJC19Q96DA6 116 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 CEP170P1Q96L14 293 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 CEP89Q96ST8 783 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 SMARCAD1Q9H4L7 1026 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 TUT1Q9H6E5 874 aaKnown RBP12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 GPRC5CQ9NQ84 441 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 Q9Y3F1 56 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 ARHGEF35A5YM69 484 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 SLC26A4O43511 780 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 KLRC4O43908 158 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 F2P00734 622 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 BMP6P22004 513 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 MUTP22033 750 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 IGBP1P78318 339 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 KCNA10Q16322 511 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 CCSAPQ6IQ19 270 aaPredicted RBP12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 FBXO46Q6PJ61 603 aaPredicted RBP12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 LRSAM1Q6UWE0 723 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 RBM43Q6ZSC3 357 aaKnown RBP12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 C1orf186Q6ZWK4 172 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 KLHDC9Q8NEP7 349 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 ATP8B4Q8TF62 1192 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 DEFB118Q96PH6 123 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 REEP2Q9BRK0 252 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 CUEDC2Q9H467 287 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 CYP26B1Q9NR63 512 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 ERAP1Q9NZ08 941 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 USP25Q9UHP3 1055 aa12.86□□□□□ -0.35
ZC3HC1-201ENST00000311873 GTPBP6O43824 516 aaPredicted RBP12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 ASIC1P78348 528 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 DRP2Q13474 957 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 LRRC41Q15345 812 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 TARBP2Q15633 366 aaKnown RBP12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 KIAA0753Q2KHM9 967 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 DAW1Q8N136 415 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 GLIS3Q8NEA6 775 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 PYM1Q9BRP8 204 aaKnown RBP12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 FGFBP2Q9BYJ0 223 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 RNF208Q9H0X6 261 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 PAK6Q9NQU5 681 aaPredicted RBP12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 XPNPEP1Q9NQW7 623 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 KIAA1468Q9P260 1216 aa12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 DBR1Q9UK59 544 aaKnown RBP12.85□□□□□ -0.35
ZC3HC1-201ENST00000311873 ASGR1P07306 291 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 INSRRP14616 1297 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 MAPK7Q13164 816 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 GIT2Q14161 759 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 SMYD4Q8IYR2 804 aaPredicted RBP12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 ZNF333Q96JL9 665 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 C7orf25Q9BPX7 421 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 ANKEF1Q9NU02 776 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 MAN1B1Q9UKM7 699 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 KIAA0100Q14667 2235 aaKnown RBP12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 TRIP12Q14669 1992 aaPredicted RBP12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 SCN10AQ9Y5Y9 1956 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 LOXHD1Q8IVV2 1947 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 IDEP14735 1019 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 SARSP49591 514 aaKnown RBP12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 NKX3-2P78367 333 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 ZNF200P98182 395 aaPredicted RBP12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 MFSD10Q14728 455 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 KANK3Q6NY19 840 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 SPATA20Q8TB22 786 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 PPP1R9BQ96SB3 815 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 MAGEF1Q9HAY2 307 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 SETD4Q9NVD3 440 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 TBC1D7Q9P0N9 293 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 TUBE1Q9UJT0 475 aa12.84□□□□□ -0.35
ZC3HC1-201ENST00000311873 GRIN2DO15399 1336 aa12.83□□□□□ -0.36
ZC3HC1-201ENST00000311873 HIP1RO75146 1068 aa12.83□□□□□ -0.36
ZC3HC1-201ENST00000311873 LETM1O95202 739 aaPredicted RBP12.83□□□□□ -0.36
ZC3HC1-201ENST00000311873 RPN1P04843 607 aaKnown RBP12.83□□□□□ -0.36
ZC3HC1-201ENST00000311873 GJB1P08034 283 aa12.83□□□□□ -0.36
ZC3HC1-201ENST00000311873 PSEN2P49810 448 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms