RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 DYDC2Q96IM9 177 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 ANKRD31Q8N7Z5 1873 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 ZNF233A6NK53 670 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 TULP1O00294 542 aaPredicted RBP27.71■■■□□ 2.03
HOXB3-201ENST00000311626 OPA1O60313 960 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 BMP3P12645 472 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 PDCLQ13371 301 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 RINT1Q6NUQ1 792 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 CCDC174Q6PII3 467 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 WDR18Q9BV38 432 aa27.71■■■□□ 2.03
HOXB3-201ENST00000311626 GOLGA8KD6RF30 607 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 PDXKO00764 312 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 TGFB1I1O43294 461 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 KIF4AO95239 1232 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 PPFIA1Q13136 1202 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 GLE1Q53GS7 698 aaKnown RBP27.7■■■□□ 2.02
HOXB3-201ENST00000311626 CFAP58Q5T655 872 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 TATDN1Q6P1N9 297 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 TMEM179Q6ZVK1 233 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 PIK3R5Q8WYR1 880 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 TMX4Q9H1E5 349 aaPredicted RBP27.7■■■□□ 2.02
HOXB3-201ENST00000311626 TYW1Q9NV66 732 aaKnown RBP27.7■■■□□ 2.02
HOXB3-201ENST00000311626 SHOX2O60902 331 aaPredicted RBP27.7■■■□□ 2.02
HOXB3-201ENST00000311626 EPB41P11171 864 aaKnown RBP27.7■■■□□ 2.02
HOXB3-201ENST00000311626 PLS1Q14651 629 aa27.7■■■□□ 2.02
HOXB3-201ENST00000311626 ECE2O60344 883 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 MMP10P09238 476 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 NNTQ13423 1086 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 MOXD1Q6UVY6 613 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 GBP6Q6ZN66 633 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 PLCB1Q9NQ66 1216 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 PRR12Q9ULL5 1215 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 PAK2Q13177 524 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 HLTFQ14527 1009 aaKnown RBP eCLIP27.69■■■□□ 2.02
HOXB3-201ENST00000311626 SLC27A3Q5K4L6 730 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 DACT2Q5SW24 774 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 ALS2CLQ60I27 953 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 RNF14Q9UBS8 474 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 SAMM50Q9Y512 469 aa27.69■■■□□ 2.02
HOXB3-201ENST00000311626 DDX3XO00571 662 aaKnown RBP eCLIP27.68■■■□□ 2.02
HOXB3-201ENST00000311626 BCAS4Q8TDM0 211 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 RUBCNQ92622 972 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 FAM20AQ96MK3 541 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 DDX47Q9H0S4 455 aaKnown RBP27.68■■■□□ 2.02
HOXB3-201ENST00000311626 GRIN2DO15399 1336 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 ITGA4P13612 1032 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 TNFRSF8P28908 595 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 ALDH1B1P30837 517 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 ERVK-9P63128 1117 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 ZYXQ15942 572 aaKnown RBP27.68■■■□□ 2.02
HOXB3-201ENST00000311626 METTL13Q8N6R0 699 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 RDH13Q8NBN7 331 aa27.68■■■□□ 2.02
HOXB3-201ENST00000311626 FAM13AO94988 1023 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 CYP2J2P51589 502 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 LRRC57Q8N9N7 239 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 ACER1Q8TDN7 264 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 VGLL3A8MV65 326 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 TBX3O15119 743 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 EYA4O95677 639 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 TRIM49P0CI25 452 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 TRIM49CP0CI26 452 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 PODNQ7Z5L7 613 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 IQCKQ8N0W5 287 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 TPCN2Q8NHX9 752 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 QSER1Q2KHR3 1735 aa27.67■■■□□ 2.02
HOXB3-201ENST00000311626 SLITRK3O94933 977 aa27.66■■■□□ 2.02
HOXB3-201ENST00000311626 MAEAQ7L5Y9 396 aa27.66■■■□□ 2.02
HOXB3-201ENST00000311626 OR2W6PQ8NHA6 318 aa27.66■■■□□ 2.02
HOXB3-201ENST00000311626 IDI2Q9BXS1 227 aa27.66■■■□□ 2.02
HOXB3-201ENST00000311626 CENPHQ9H3R5 247 aa27.66■■■□□ 2.02
HOXB3-201ENST00000311626 WRAP73Q9P2S5 460 aaPredicted RBP27.66■■■□□ 2.02
HOXB3-201ENST00000311626 ZEB2O60315 1214 aa27.66■■■□□ 2.02
HOXB3-201ENST00000311626 RBM26Q5T8P6 1007 aaKnown RBP27.66■■■□□ 2.02
HOXB3-201ENST00000311626 PRMT6Q96LA8 375 aaPredicted RBP27.66■■■□□ 2.02
HOXB3-201ENST00000311626 OSGEPQ9NPF4 335 aa27.66■■■□□ 2.02
HOXB3-201ENST00000311626 ZMYM2Q9UBW7 1377 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 C10orf71Q711Q0 1435 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 IGLV3-22A0A075B6J6 115 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 GLYCTKQ8IVS8 523 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 FAM186BQ8IYM0 893 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 PKD2L1Q9P0L9 805 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 FOSP01100 380 aaPredicted RBP27.65■■■□□ 2.02
HOXB3-201ENST00000311626 ABCB4P21439 1286 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 JAM2P57087 298 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 AOC3Q16853 763 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 BANK1Q8NDB2 785 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 LNX1Q8TBB1 728 aaPredicted RBP27.65■■■□□ 2.02
HOXB3-201ENST00000311626 CSRNP1Q96S65 589 aa27.65■■■□□ 2.02
HOXB3-201ENST00000311626 ONECUT3O60422 494 aaPredicted RBP27.64■■■□□ 2.02
HOXB3-201ENST00000311626 RPL13P26373 211 aaKnown RBP27.64■■■□□ 2.02
HOXB3-201ENST00000311626 TNNC1P63316 161 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 LRCH2Q5VUJ6 765 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 NAA35Q5VZE5 725 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 PEX26Q7Z412 305 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 MAATS1Q7Z4T9 603 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 DAAM2Q86T65 1068 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 GMCL1P1Q8NEA9 526 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 MASTLQ96GX5 879 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 GMCL1Q96IK5 515 aa27.64■■■□□ 2.02
HOXB3-201ENST00000311626 NEUROG2Q9H2A3 272 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms