RNA–Protein interactions for RNA: ENST00000310032.12

TSPAN17-202, Transcript of tetraspanin 17, humanhuman

TSL 5 BASIC

Gene TSPAN17, Length 2,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-202ENST00000310032 ITGA4P13612 1032 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 PSEN1P49768 467 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 FXR2P51116 673 aaKnown RBP eCLIP21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 USP11P51784 963 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 ZNF543Q08ER8 600 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 PSMD2Q13200 908 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 BIRC3Q13489 604 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 SNCBQ16143 134 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 RUFY4Q6ZNE9 571 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 RPAINQ86UA6 219 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 AIPL1Q9NZN9 384 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 AMACRQ9UHK6 382 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 GDF11O95390 407 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 MMP14P50281 582 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 MAGOHP61326 146 aaKnown RBP21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 PTK2Q05397 1052 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 MAGOHBQ96A72 148 aaKnown RBP21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 DNAJC19Q96DA6 116 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 FAM198AQ9UFP1 575 aa21.7■■□□□ 1.06
TSPAN17-202ENST00000310032 ACTN1P12814 892 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 JAG1P78504 1218 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 WLSQ5T9L3 541 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 CHADLQ6NUI6 762 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 TRIM59Q8IWR1 403 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 METTL13Q8N6R0 699 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 EIF1ADQ8N9N8 165 aaKnown RBP21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 ACTRT1Q8TDG2 376 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 NOC2LQ9Y3T9 749 aaKnown RBP21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 NRXN2Q9P2S2 1712 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 PLIN4Q96Q06 1357 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 OPLAHO14841 1288 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 ECE2O60344 883 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 ELF1P32519 619 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 SCTRP47872 440 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 TMEM266Q2M3C6 531 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 KRT79Q5XKE5 535 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 ZNF571Q7Z3V5 609 aaPredicted RBP21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 CACNA2D3Q8IZS8 1091 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 PBKQ96KB5 322 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 SCLT1Q96NL6 688 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 GANQ9H2C0 597 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 TPX2Q9ULW0 747 aaKnown RBP21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 CEP83Q9Y592 693 aa21.69■■□□□ 1.06
TSPAN17-202ENST00000310032 FOCADQ5VW36 1801 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 BHMG1C9JSJ3 638 aaPredicted RBP21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 CES2O00748 559 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 PLSCR1O15162 318 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 CACNB1Q02641 598 aaPredicted RBP21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 N4BP2L2Q92802 583 aaPredicted RBP21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 PANK4Q9NVE7 773 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 ODF2LQ9ULJ1 636 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 TMCO5BA8MYB1 307 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 KRIT1O00522 736 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 C21orf2O43822 256 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 FAM26FQ5R3K3 315 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 LRRC57Q8N9N7 239 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 C3orf20Q8ND61 904 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 MDM1Q8TC05 714 aa21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 CELF4Q9BZC1 486 aaKnown RBP21.68■■□□□ 1.06
TSPAN17-202ENST00000310032 C5orf60A6NFR6 353 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L15C9J2P7 530 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L13C9JLJ4 530 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L11C9JVI0 530 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L18D6R9N7 530 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L22D6RA61 530 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L17D6RBQ6 530 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L19D6RCP7 530 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L20D6RJB6 530 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 PGRMC1O00264 195 aaKnown RBP21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 ZBTB48P10074 688 aaPredicted RBP21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 ADCY7P51828 1080 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L24Q0WX57 530 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 DACT2Q5SW24 774 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 AGBL2Q5U5Z8 902 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 USP17L6PQ6QN14 398 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 HHIPL2Q6UWX4 724 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 TATDN2Q93075 761 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 SGSM3Q96HU1 749 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 TTI1O43156 1089 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 CHRM1P11229 460 aaPredicted RBP21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 NF2P35240 595 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 E2F5Q15329 346 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 KRT71Q3SY84 523 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 TMEM119Q4V9L6 283 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 ASPRV1Q53RT3 343 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 IRF2BP2Q7Z5L9 587 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 CPLX4Q7Z7G2 160 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 DPH5Q9H2P9 285 aa21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 TDRD3Q9H7E2 651 aaKnown RBP21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.67■■□□□ 1.06
TSPAN17-202ENST00000310032 EEF2P13639 858 aaKnown RBP21.66■■□□□ 1.06
TSPAN17-202ENST00000310032 SCP2P22307 547 aa21.66■■□□□ 1.06
TSPAN17-202ENST00000310032 NT5C2P49902 561 aa21.66■■□□□ 1.06
TSPAN17-202ENST00000310032 SF3A3Q12874 501 aaKnown RBP eCLIP21.66■■□□□ 1.069e-7■■■■□ 24.7
TSPAN17-202ENST00000310032 SEPT2Q15019 361 aa21.66■■□□□ 1.06
TSPAN17-202ENST00000310032 TMC3Q7Z5M5 1100 aa21.66■■□□□ 1.06
TSPAN17-202ENST00000310032 SLX4Q8IY92 1834 aa21.66■■□□□ 1.06
TSPAN17-202ENST00000310032 NPHP3-ACAD11A0A0J9YXS1 232 aa21.66■■□□□ 1.06
TSPAN17-202ENST00000310032 EPS15P42566 896 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms