RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 BCO2Q9BYV7 579 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 RNF32Q9H0A6 362 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 ADAMTS10Q9H324 1103 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 PRO3102Q9H379 93 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 TMPRSS5Q9H3S3 457 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 TMEM59LQ9UK28 342 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 CNOT6Q9ULM6 557 aaKnown RBP5.8□□□□□ -1.48
CKS1B-201ENST00000308987 TTF2Q9UNY4 1162 aaKnown RBP5.8□□□□□ -1.48
CKS1B-201ENST00000308987 RIPOR2Q9Y4F9 1068 aa5.8□□□□□ -1.48
CKS1B-201ENST00000308987 DDX49Q9Y6V7 483 aaKnown RBP5.8□□□□□ -1.48
CKS1B-201ENST00000308987 REV3LO60673 3130 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 ADGRA2Q96PE1 1338 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 MYOCOSA0A1B0GUC4 107 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 ERC2O15083 957 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 MBD3O95983 291 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 CRKP46108 304 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 NASPP49321 788 aaPredicted RBP5.79□□□□□ -1.48
CKS1B-201ENST00000308987 RBM5P52756 815 aaKnown RBP eCLIP5.79□□□□□ -1.48
CKS1B-201ENST00000308987 LACTBP83111 547 aaPredicted RBP5.79□□□□□ -1.48
CKS1B-201ENST00000308987 IFIT5Q13325 482 aaKnown RBP5.79□□□□□ -1.48
CKS1B-201ENST00000308987 SLC9C1Q4G0N8 1177 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 LRRC24Q50LG9 513 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 APOBEC3HQ6NTF7 200 aaKnown RBP5.79□□□□□ -1.48
CKS1B-201ENST00000308987 NXPE4Q6UWF7 544 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 LDHAL6AQ6ZMR3 332 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 ZSCAN30Q86W11 494 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 GAS2L3Q86XJ1 694 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 VGLL2Q8N8G2 317 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 KCT2Q8NC54 265 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 ZKSCAN4Q969J2 545 aaPredicted RBP5.79□□□□□ -1.48
CKS1B-201ENST00000308987 INTS4Q96HW7 963 aaKnown RBP5.79□□□□□ -1.48
CKS1B-201ENST00000308987 SUCLG2Q96I99 432 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 PDLIM2Q96JY6 352 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 DMRTB1Q96MA1 342 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 CHMP4AQ9BY43 222 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 SRCIN1Q9C0H9 1055 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 SAMM50Q9Y512 469 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 ADAMTS20P59510 1910 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 DOCK1Q14185 1865 aa5.79□□□□□ -1.48
CKS1B-201ENST00000308987 PRAMEF27A3QJZ7 478 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 GRM8O00222 908 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 MYO1BO43795 1136 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 TLR2O60603 784 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 FBXO24O75426 580 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 CBX7O95931 251 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 ESR1P03372 595 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 GNAI3P08754 354 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 NBPF7P0C2Y1 421 aaPredicted RBP5.78□□□□□ -1.48
CKS1B-201ENST00000308987 XRCC5P13010 732 aaKnown RBP5.78□□□□□ -1.48
CKS1B-201ENST00000308987 SDSP20132 328 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 MCCP23508 829 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 HIBADHP31937 336 aaKnown RBP5.78□□□□□ -1.48
CKS1B-201ENST00000308987 GTF2A2P52657 109 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 CUL4AQ13619 759 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 UBE4AQ14139 1066 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 ZNF385BQ569K4 471 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 OTUD7BQ6GQQ9 843 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 C17orf99Q6UX52 265 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 ZNF605Q86T29 641 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 RIN3Q8TB24 985 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 GRIN3AQ8TCU5 1115 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 XYLT2Q9H1B5 865 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 C1orf115Q9H7X2 142 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 SP110Q9HB58 689 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 CNNM1Q9NRU3 951 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 LMBRD1Q9NUN5 540 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 STAP2Q9UGK3 403 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 PCDHA4Q9UN74 947 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 USTQ9Y2C2 406 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 KCTD3Q9Y597 815 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 SIPA1L1O43166 1804 aa5.78□□□□□ -1.48
CKS1B-201ENST00000308987 FRMPD3Q5JV73 1810 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 ZNF500O60304 480 aaPredicted RBP5.77□□□□□ -1.49
CKS1B-201ENST00000308987 PEX10O60683 326 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 SEMA7AO75326 666 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 OFD1O75665 1012 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 CHAF1AQ13111 956 aaPredicted RBP5.77□□□□□ -1.49
CKS1B-201ENST00000308987 PPIL2Q13356 520 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 TNFAIP1Q13829 316 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 SLC4A8Q2Y0W8 1093 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.77□□□□□ -1.49
CKS1B-201ENST00000308987 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.77□□□□□ -1.49
CKS1B-201ENST00000308987 MIGA2Q7L4E1 593 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 ERO1BQ86YB8 467 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 ZFPM1Q8IX07 1006 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 KLHDC4Q8TBB5 520 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 ZNF507Q8TCN5 953 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 NAP1L5Q96NT1 182 aaPredicted RBP5.77□□□□□ -1.49
CKS1B-201ENST00000308987 WRNIP1Q96S55 665 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 MIPEPQ99797 713 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 GCM1Q9NP62 436 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 CPA4Q9UI42 421 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 MYO9BQ13459 2157 aa5.77□□□□□ -1.49
CKS1B-201ENST00000308987 TTC28Q96AY4 2481 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 UTYO14607 1347 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 SALL3Q9BXA9 1300 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 LOC285556D6RIA3 1793 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 PNMA6FA0A0J9YX94 578 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 GNAI2P04899 355 aa5.76□□□□□ -1.49
CKS1B-201ENST00000308987 ADRB1P08588 477 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms