RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 BIRC3Q13489 604 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 PPP4R3CPQ6ZMV5 832 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 ACER1Q8TDN7 264 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 DYDC1Q8WWB3 177 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 ZNF277Q9NRM2 450 aaPredicted RBP11.65□□□□□ -0.54
MUC4-201ENST00000308466 BZW2Q9Y6E2 419 aaKnown RBP11.65□□□□□ -0.54
MUC4-201ENST00000308466 A0A1B0GUA9 196 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 GOLGA8IPA6NC78 632 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 GOLGA8JA6NMD2 632 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 GAP43P17677 238 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 CNKSR2Q8WXI2 1034 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 PAIP2Q9BPZ3 127 aaKnown RBP11.65□□□□□ -0.54
MUC4-201ENST00000308466 FBXO28Q9NVF7 368 aa11.65□□□□□ -0.54
MUC4-201ENST00000308466 REXO2Q9Y3B8 237 aaKnown RBP11.65□□□□□ -0.54
MUC4-201ENST00000308466 GAKO14976 1311 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 A0A087X0T9 212 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 H3BQF6 201 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 RGL2O15211 777 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 FANCGO15287 622 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 FAM228BP0C875 321 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 POTEJP0CG39 1038 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 DLATP10515 647 aaKnown RBP11.64□□□□□ -0.55
MUC4-201ENST00000308466 E2F5Q15329 346 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
MUC4-201ENST00000308466 FMNL3Q8IVF7 1028 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 BCAS4Q8TDM0 211 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 ZNF341Q9BYN7 854 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 WDR11Q9BZH6 1224 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 ODF2LQ9ULJ1 636 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 LRP6O75581 1613 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 ABCB11O95342 1321 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 HOXA10P31260 410 aaPredicted RBP11.64□□□□□ -0.55
MUC4-201ENST00000308466 EPHB4P54760 987 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 MYL7Q01449 175 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 SYCE1Q8N0S2 351 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 UHMK1Q8TAS1 419 aaKnown RBP11.64□□□□□ -0.55
MUC4-201ENST00000308466 HAS1Q92839 578 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 DNAJC12Q9UKB3 198 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 UTP11Q9Y3A2 253 aaKnown RBP11.64□□□□□ -0.55
MUC4-201ENST00000308466 NUP98P52948 1817 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 SPATA31A6Q5VVP1 1343 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 LAMA4Q16363 1823 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 FERP16591 822 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 GJB7Q6PEY0 223 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 EFCAB13Q8IY85 973 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 SCFD1Q8WVM8 642 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 SGSM3Q96HU1 749 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 TAOK3Q9H2K8 898 aa11.64□□□□□ -0.55
MUC4-201ENST00000308466 UBE2TQ9NPD8 197 aaPredicted RBP11.64□□□□□ -0.55
MUC4-201ENST00000308466 TYW1Q9NV66 732 aaKnown RBP11.64□□□□□ -0.55
MUC4-201ENST00000308466 DMGDHQ9UI17 866 aaKnown RBP11.64□□□□□ -0.55
MUC4-201ENST00000308466 A0A1W2PQJ5 194 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 UCHL3P15374 230 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 RPA1P27694 616 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 CASP4P49662 377 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 NLRX1Q86UT6 975 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 LRRIQ3A6PVS8 624 aaPredicted RBP11.63□□□□□ -0.55
MUC4-201ENST00000308466 IPO5O00410 1097 aaKnown RBP11.63□□□□□ -0.55
MUC4-201ENST00000308466 ZBED4O75132 1171 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 MESDQ14696 234 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 SLC18A3Q16572 532 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 ECM1Q16610 540 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 MIIPQ5JXC2 388 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 ARHGEF16Q5VV41 709 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 CCNI2Q6ZMN8 369 aaPredicted RBP11.63□□□□□ -0.55
MUC4-201ENST00000308466 USP37Q86T82 979 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 GLYCTKQ8IVS8 523 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 RNF10Q8N5U6 811 aaKnown RBP11.63□□□□□ -0.55
MUC4-201ENST00000308466 CAPS2Q9BXY5 557 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 A0A087WUV0 522 aaPredicted RBP11.63□□□□□ -0.55
MUC4-201ENST00000308466 MSH4O15457 936 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 SKAP2O75563 359 aaPredicted RBP11.63□□□□□ -0.55
MUC4-201ENST00000308466 CTNNA1P35221 906 aaKnown RBP11.63□□□□□ -0.55
MUC4-201ENST00000308466 CCDC50Q8IVM0 306 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 MSANTD4Q8NCY6 345 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 ZDHHC15Q96MV8 337 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 FNBP1Q96RU3 617 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 EDEM3Q9BZQ6 932 aa11.63□□□□□ -0.55
MUC4-201ENST00000308466 RBM12Q9NTZ6 932 aaKnown RBP11.63□□□□□ -0.55
MUC4-201ENST00000308466 AKAP11Q9UKA4 1901 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 SSU72P8A0A1W2PR75 194 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 PPP1R11O60927 126 aaPredicted RBP11.62□□□□□ -0.55
MUC4-201ENST00000308466 GCLMP48507 274 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 PTK2Q05397 1052 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 ACTN3Q08043 901 aaPredicted RBP11.62□□□□□ -0.55
MUC4-201ENST00000308466 KRT71Q3SY84 523 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 CRY2Q49AN0 593 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 C15orf52Q6ZUT6 534 aaKnown RBP11.62□□□□□ -0.55
MUC4-201ENST00000308466 LRRC45Q96CN5 670 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 SELENOSQ9BQE4 189 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 PACSIN1Q9BY11 444 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 TRIM6Q9C030 488 aaPredicted RBP11.62□□□□□ -0.55
MUC4-201ENST00000308466 G3BP2Q9UN86 482 aaKnown RBP11.62□□□□□ -0.55
MUC4-201ENST00000308466 BCL9LQ86UU0 1499 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 PPP1R12AO14974 1030 aaPredicted RBP11.62□□□□□ -0.55
MUC4-201ENST00000308466 EYA4O95677 639 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 EZRP15311 586 aaKnown RBP11.62□□□□□ -0.55
MUC4-201ENST00000308466 PAX7P23759 505 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 PRELPP51888 382 aa11.62□□□□□ -0.55
MUC4-201ENST00000308466 PEX3P56589 373 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms